RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 RGL1Q9NZL6 768 aa16.99■□□□□ 0.31
DDX39A-211ENST00000590239 GNEQ9Y223 722 aaKnown RBP16.99■□□□□ 0.31
DDX39A-211ENST00000590239 IGKV6D-21A0A0A0MT36 114 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 POTEB3A0JP26 581 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 ACTN4O43707 911 aaKnown RBP16.98■□□□□ 0.31
DDX39A-211ENST00000590239 SORBS3O60504 671 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 LYPLA2O95372 231 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 PRKAR2AP13861 404 aaKnown RBP16.98■□□□□ 0.31
DDX39A-211ENST00000590239 GRK4P32298 578 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-211ENST00000590239 PSMC5P62195 406 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 SP4Q02446 784 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 CYP4A11Q02928 519 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 ZRSR1Q15695 479 aaKnown RBP16.98■□□□□ 0.31
DDX39A-211ENST00000590239 LONRF3Q496Y0 759 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 KANK3Q6NY19 840 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 POTEBQ6S5H4 581 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 KRBA2Q6ZNG9 492 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 TPH2Q8IWU9 490 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 ELOA2Q8IYF1 753 aaPredicted RBP16.98■□□□□ 0.31
DDX39A-211ENST00000590239 CEP57L1Q8IYX8 460 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 ATP6V0A1Q93050 837 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 KIAA1024Q9UPX6 916 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 PTPN22Q9Y2R2 807 aa16.98■□□□□ 0.31
DDX39A-211ENST00000590239 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 SEPT4O43236 478 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 ADCY6O43306 1168 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 DUSP11O75319 330 aaKnown RBP16.97■□□□□ 0.31
DDX39A-211ENST00000590239 TRIM32Q13049 653 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 CTTNQ14247 550 aaKnown RBP16.97■□□□□ 0.31
DDX39A-211ENST00000590239 ECM1Q16610 540 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 HSDL1Q3SXM5 330 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 NAALADL2Q58DX5 795 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 GJC2Q5T442 439 aaPredicted RBP16.97■□□□□ 0.31
DDX39A-211ENST00000590239 PDXDC2PQ6P474 469 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 POTEGQ6S5H5 508 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 CNNM3Q8NE01 707 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 OR6J1Q8NGC5 347 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 NACC1Q96RE7 527 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 PLIN2Q99541 437 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 LXNQ9BS40 222 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 CLSTN2Q9H4D0 955 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 SERTAD1Q9UHV2 236 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 HOOK1Q9UJC3 728 aaKnown RBP16.97■□□□□ 0.31
DDX39A-211ENST00000590239 DNM3Q9UQ16 869 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 TELO2Q9Y4R8 837 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 PTCH2Q9Y6C5 1203 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 DOCK5Q9H7D0 1870 aa16.97■□□□□ 0.31
DDX39A-211ENST00000590239 BACH1O14867 736 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 CTAGE5O15320 804 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 LGR5O75473 907 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 XRCC6P12956 609 aaKnown RBP eCLIP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 TCF7P36402 384 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 MLLT1Q03111 559 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 CCDC183Q5T5S1 534 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 FAM160B1Q5W0V3 765 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 SWSAP1Q6NVH7 229 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 CAVIN1Q6NZI2 390 aaKnown RBP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 C4orf19Q8IY42 314 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 AFAP1L1Q8TED9 768 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 ABHD8Q96I13 439 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 AP5M1Q9H0R1 490 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 NUP62CLQ9H1M0 184 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 GABBR1Q9UBS5 961 aa16.96■□□□□ 0.31
DDX39A-211ENST00000590239 MAFBQ9Y5Q3 323 aaPredicted RBP16.96■□□□□ 0.31
DDX39A-211ENST00000590239 A6NJR5 290 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 DYNC1LI2O43237 492 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-211ENST00000590239 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 INHAP05111 366 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 NKX3-2P78367 333 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 UGCGQ16739 394 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 KCNK18Q7Z418 384 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 CTU1Q7Z7A3 348 aaKnown RBP16.95■□□□□ 0.3
DDX39A-211ENST00000590239 TLK2Q86UE8 772 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 CCDC60Q8IWA6 550 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-211ENST00000590239 LRRC15Q8TF66 581 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 RAD54LQ92698 747 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 AZI2Q9H6S1 392 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 ZNF302Q9NR11 478 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 KBTBD4Q9NVX7 518 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 WRAP73Q9P2S5 460 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-211ENST00000590239 EMSYQ7Z589 1322 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 IGSF9BQ9UPX0 1349 aa16.95■□□□□ 0.3
DDX39A-211ENST00000590239 EYA4O95677 639 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 RARBP10826 455 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 CNGA1P29973 690 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 CCND3P30281 292 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-211ENST00000590239 SLC26A2P50443 739 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 STAT5BP51692 787 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 LBX1P52954 281 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 BRDTQ58F21 947 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-211ENST00000590239 SV2BQ7L1I2 683 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 PLPPR4Q7Z2D5 763 aa16.94■□□□□ 0.3
DDX39A-211ENST00000590239 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms