RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 SLC5A5Q92911 643 aa18.58■□□□□ 0.56
DNMT1-221ENST00000589538 TEKT3Q9BXF9 490 aa18.58■□□□□ 0.56
DNMT1-221ENST00000589538 DDX25Q9UHL0 483 aaKnown RBP18.58■□□□□ 0.56
DNMT1-221ENST00000589538 PCDHA10Q9Y5I2 948 aa18.58■□□□□ 0.56
DNMT1-221ENST00000589538 TRIP12Q14669 1992 aaPredicted RBP18.58■□□□□ 0.56
DNMT1-221ENST00000589538 WDR64B1ANS9 1081 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 DTNBO60941 627 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 TDP2O95551 362 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 FGBP02675 491 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 RPLP2P05387 115 aaKnown RBP18.57■□□□□ 0.56
DNMT1-221ENST00000589538 CKBP12277 381 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 MARK3P27448 753 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 PPFIA1Q13136 1202 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 GPR153Q6NV75 609 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 LRRC8DQ7L1W4 858 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 RDM1Q8NG50 284 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 LMBR1Q8WVP7 490 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 DHX38Q92620 1227 aaKnown RBP18.57■□□□□ 0.56
DNMT1-221ENST00000589538 TNFRSF25Q93038 417 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 SCLYQ96I15 445 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 FAM20AQ96MK3 541 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 PCYT2Q99447 389 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.57■□□□□ 0.567e-11■■■□□ 18.7
DNMT1-221ENST00000589538 ZNF302Q9NR11 478 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
DNMT1-221ENST00000589538 BTBD18B2RXH4 712 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TBX3O15119 743 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TREHO43280 583 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 ACTN1P12814 892 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 JAK3P52333 1124 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 ADAM17P78536 824 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 ZNF200P98182 395 aaPredicted RBP18.56■□□□□ 0.56
DNMT1-221ENST00000589538 NR5A1Q13285 461 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 GRIK4Q16099 956 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TRIM71Q2Q1W2 868 aaKnown RBP18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TAF2Q6P1X5 1199 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 PDXDC2PQ6P474 469 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 ZNF365Q70YC5 407 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TMX3Q96JJ7 454 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 TRPC6Q9Y210 931 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 SAMM50Q9Y512 469 aa18.56■□□□□ 0.56
DNMT1-221ENST00000589538 MYH9P35579 1960 aaKnown RBP18.55■□□□□ 0.56
DNMT1-221ENST00000589538 POTEB3A0JP26 581 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 HBP1O60381 514 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 CCNT1O60563 726 aaKnown RBP18.55■□□□□ 0.56
DNMT1-221ENST00000589538 ACRP10323 421 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 FOSBP53539 338 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 HIC1Q14526 733 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 SWSAP1Q6NVH7 229 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 POTEBQ6S5H4 581 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 RSPH3Q86UC2 560 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 FBXO18Q8NFZ0 1043 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 ETNPPLQ8TBG4 499 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 HERVK_113Q902F9 699 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 FOXP1Q9H334 677 aaPredicted RBP18.55■□□□□ 0.56
DNMT1-221ENST00000589538 TUBE1Q9UJT0 475 aa18.55■□□□□ 0.56
DNMT1-221ENST00000589538 MBLAC1A4D2B0 266 aaPredicted RBP18.54■□□□□ 0.56
DNMT1-221ENST00000589538 PSMD10O75832 226 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 BAG4O95429 457 aaKnown RBP18.54■□□□□ 0.56
DNMT1-221ENST00000589538 THPOP40225 353 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 SMAD3P84022 425 aaKnown RBP18.54■□□□□ 0.56
DNMT1-221ENST00000589538 PLCB4Q15147 1175 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 CCDC60Q8IWA6 550 aaPredicted RBP18.54■□□□□ 0.56
DNMT1-221ENST00000589538 ATP8B4Q8TF62 1192 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 FAM167AQ96KS9 214 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 UIMC1Q96RL1 719 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 DISC1Q9NRI5 854 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 MAFBQ9Y5Q3 323 aaPredicted RBP18.54■□□□□ 0.56
DNMT1-221ENST00000589538 COL1A2P08123 1366 aa18.54■□□□□ 0.56
DNMT1-221ENST00000589538 SLC37A4O43826 429 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 MARCH6O60337 910 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 INSRRP14616 1297 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 EARS2Q5JPH6 523 aaKnown RBP18.53■□□□□ 0.56
DNMT1-221ENST00000589538 ZNF618Q5T7W0 954 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 DEFB128Q7Z7B8 93 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 RPAINQ86UA6 219 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 SLFN12Q8IYM2 578 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 BBXQ8WY36 941 aaPredicted RBP18.53■□□□□ 0.56
DNMT1-221ENST00000589538 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
DNMT1-221ENST00000589538 KCNMB3Q9NPA1 279 aa18.53■□□□□ 0.56
DNMT1-221ENST00000589538 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.53■□□□□ 0.56
DNMT1-221ENST00000589538 SCN5AQ14524 2016 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.52■□□□□ 0.56
DNMT1-221ENST00000589538 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.52■□□□□ 0.56
DNMT1-221ENST00000589538 RSPH10B2B2RC85 870 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 SOX1O00570 391 aaPredicted RBP18.52■□□□□ 0.56
DNMT1-221ENST00000589538 RSPH10BP0C881 870 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 GUCY1B3Q02153 619 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 GNL2Q13823 731 aaKnown RBP18.52■□□□□ 0.56
DNMT1-221ENST00000589538 ZNF484Q5JVG2 852 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 MIER3Q7Z3K6 550 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 CKAP2LQ8IYA6 745 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 UNC45AQ9H3U1 944 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 GABBR1Q9UBS5 961 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 CEP131Q9UPN4 1083 aa18.52■□□□□ 0.56
DNMT1-221ENST00000589538 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
DNMT1-221ENST00000589538 WDR81Q562E7 1941 aa18.51■□□□□ 0.55
DNMT1-221ENST00000589538 BAIAP3O94812 1187 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms