RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 C1orf186Q6ZWK4 172 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 EPM2AIP1Q7L775 607 aaPredicted RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 MIER3Q7Z3K6 550 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 TPH2Q8IWU9 490 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.571e-17■□□□□ 9.7
VPS25-203ENST00000589520 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 TRPM4Q8TD43 1214 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 ZC3H15Q8WU90 426 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 SCFD1Q8WVM8 642 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 GPRASP2Q96D09 838 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 DYDC2Q96IM9 177 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 MAP7D2Q96T17 732 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 AGO4Q9HCK5 861 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
VPS25-203ENST00000589520 AFG3L2Q9Y4W6 797 aa11.49□□□□□ -0.57
VPS25-203ENST00000589520 B4DLN1 442 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 NFIBO00712 420 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 SLC16A3O15427 465 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 COBLO75128 1261 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 ITGB5P18084 799 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 CCND2P30279 289 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 HNRNPH3P31942 346 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 CYLC1P35663 651 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 IREB2P48200 963 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 FXR1P51114 621 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS25-203ENST00000589520 ZNF131P52739 623 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 SNRPFP62306 86 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 PSMC6P62333 389 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 KRT76Q01546 638 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 MTMR1Q13613 665 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 MYBPC2Q14324 1141 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 PGM5Q15124 567 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 MEA1Q16626 185 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 CCDC40Q4G0X9 1142 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 ARHGEF16Q5VV41 709 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 ZNF662Q6ZS27 426 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 SULF1Q8IWU6 871 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 TXLNBQ8N3L3 684 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 NSUN6Q8TEA1 469 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 ZNF592Q92610 1267 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 HPS3Q969F9 1004 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 ZKSCAN4Q969J2 545 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 PCMTD1Q96MG8 357 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 RMDN3Q96TC7 470 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 SENP7Q9BQF6 1050 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 REEP2Q9BRK0 252 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 PDCD2LQ9BRP1 358 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 TEX13BQ9BXU2 312 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 KCTD10Q9H3F6 313 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 UNC45AQ9H3U1 944 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 ZHX3Q9H4I2 956 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 L2HGDHQ9H9P8 463 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 RNF146Q9NTX7 359 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 TYW1Q9NV66 732 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 CGNQ9P2M7 1197 aaKnown RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 FBXO40Q9UH90 709 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 KCNG1Q9UIX4 513 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 ADGRG1Q9Y653 693 aa11.48□□□□□ -0.57
VPS25-203ENST00000589520 EPN1Q9Y6I3 576 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 ASTN2O75129 1339 aaPredicted RBP11.48□□□□□ -0.57
VPS25-203ENST00000589520 TTC26A0AVF1 554 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 ARHGEF35A5YM69 484 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 KIF5CO60282 957 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 USP2O75604 605 aaPredicted RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 IPO7O95373 1038 aaKnown RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 NF2P35240 595 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 EPS15P42566 896 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 QARSP47897 775 aaKnown RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 HMGCS2P54868 508 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 TUBB4BP68371 445 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 CYP4A11Q02928 519 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 CTTNQ14247 550 aaKnown RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 LRRC41Q15345 812 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 TRIM65Q6PJ69 517 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 USP50Q70EL3 339 aaPredicted RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 VSIG10LQ86VR7 867 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 C4orf19Q8IY42 314 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 SYN2Q92777 582 aaPredicted RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 ATG4CQ96DT6 458 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 IWS1Q96ST2 819 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 TTYH3Q9C0H2 523 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 ACAD9Q9H845 621 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 MRPL44Q9H9J2 332 aaKnown RBP11.47□□□□□ -0.57
VPS25-203ENST00000589520 PXMP2Q9NR77 195 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 RGL1Q9NZL6 768 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 DAAM1Q9Y4D1 1078 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 CSADQ9Y600 493 aa11.47□□□□□ -0.57
VPS25-203ENST00000589520 ZC3H4Q9UPT8 1303 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms