RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 ZNF648Q5T619 568 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TTC39BQ5VTQ0 682 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 ZKSCAN2Q63HK3 967 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 OLFML2BQ68BL8 750 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 SLC39A5Q6ZMH5 540 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TICAM2Q86XR7 235 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 ERC1Q8IUD2 1116 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 ABRAQ8N0Z2 381 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 MIGA1Q8NAN2 632 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 SSH3Q8TE77 659 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 WNT8BQ93098 351 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 CALR3Q96L12 384 aaKnown RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 FAM161BQ96MY7 647 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 CRNKL1Q9BZJ0 848 aaKnown RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TANGO6Q9C0B7 1094 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 SAP130Q9H0E3 1048 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 CCDC8Q9H0W5 538 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 VRTNQ9H8Y1 702 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 PLXNB2O15031 1838 aa6.7□□□□□ -1.34
DNMT1-220ENST00000589351 RANBP2P49792 3224 aaKnown RBP6.7□□□□□ -1.34
DNMT1-220ENST00000589351 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 BCAR3O75815 825 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 CNMDO75829 334 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 SLC25A27O95847 323 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 FCER1AP12319 257 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 CYBAP13498 195 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 ADORA2AP29274 412 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 SMAD3P84022 425 aaKnown RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 CPSF6Q16630 551 aaKnown RBP eCLIP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 ADGRA1Q86SQ6 560 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 RNF180Q86T96 592 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 NCAPG2Q86XI2 1143 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 FTSJ3Q8IY81 847 aaKnown RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 NPLOC4Q8TAT6 608 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 PIK3R5Q8WYR1 880 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 MOV10L1Q9BXT6 1211 aaKnown RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 PPP1R12CQ9BZL4 782 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 SPATC1LQ9H0A9 340 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 OSGEPQ9NPF4 335 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 PIH1D3Q9NQM4 214 aaKnown RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 MCM9Q9NXL9 1143 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 FLRT1Q9NZU1 646 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 BTBD7Q9P203 1132 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 SWAP70Q9UH65 585 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 NRBP1Q9UHY1 535 aa6.69□□□□□ -1.34
DNMT1-220ENST00000589351 NOP58Q9Y2X3 529 aaKnown RBP6.69□□□□□ -1.34
DNMT1-220ENST00000589351 MYH1P12882 1939 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 MAST2Q6P0Q8 1798 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 TMEM265A0A087WTH1 108 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 MEGF11A6BM72 1044 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 RARBP10826 455 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 RAG1P15918 1043 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 ERCC3P19447 782 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 SHMT1P34896 483 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 COPB2P35606 906 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 ADCYAP1R1P41586 468 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 KCTD2Q14681 263 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 SEPT2Q15019 361 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 SHHQ15465 462 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 ZNF124Q15973 351 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 FBLN7Q53RD9 439 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 SLC9C2Q5TAH2 1124 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 HGSNATQ68CP4 663 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 CCDC174Q6PII3 467 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 TMEM179Q6ZVK1 233 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 TMEM57Q8N5G2 664 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 MAFAQ8NHW3 353 aaPredicted RBP6.68□□□□□ -1.34
DNMT1-220ENST00000589351 ACER1Q8TDN7 264 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 NUP133Q8WUM0 1156 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 SREK1Q8WXA9 508 aaKnown RBP6.68□□□□□ -1.34
DNMT1-220ENST00000589351 BADQ92934 168 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 CCDC17Q96LX7 622 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 GUCD1Q96NT3 240 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 CDX2Q99626 313 aaPredicted RBP6.68□□□□□ -1.34
DNMT1-220ENST00000589351 DBNLQ9UJU6 430 aaKnown RBP6.68□□□□□ -1.34
DNMT1-220ENST00000589351 COL6A3P12111 3177 aa6.68□□□□□ -1.34
DNMT1-220ENST00000589351 FOCADQ5VW36 1801 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 DCDC2CA8MYV0 355 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 CCER2I3L3R5 266 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 CYP26A1O43174 497 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 FLOT1O75955 427 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 PLCD1P51178 756 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 LRRC41Q15345 812 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 NFKBIBQ15653 356 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 SHROOM1Q2M3G4 852 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 ANO1Q5XXA6 986 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 DNAJC14Q6Y2X3 702 aaPredicted RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 AACSQ86V21 672 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 ITPRIPQ8IWB1 547 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 CLASRPQ8N2M8 674 aaKnown RBP6.67□□□□□ -1.34
DNMT1-220ENST00000589351 FLCNQ8NFG4 579 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 FERMT2Q96AC1 680 aa6.67□□□□□ -1.34
DNMT1-220ENST00000589351 EAF2Q96CJ1 260 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms