RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 TRMT2AQ8IZ69 625 aaKnown RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 CELF2-AS1Q8N7Q2 184 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 BVESQ8NE79 360 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 ST13P5Q8NFI4 369 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 ATL2Q8NHH9 583 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 HDAC7Q8WUI4 952 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 UBXN4Q92575 508 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 BRF1Q92994 677 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 TEKT1Q969V4 418 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 MAP6Q96JE9 813 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 OSBPL9Q96SU4 736 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 JPH2Q9BR39 696 aaPredicted RBP6.9□□□□□ -1.3
SMAD4-203ENST00000585448 FAM86C1Q9NVL1 165 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 RGL1Q9NZL6 768 aa6.9□□□□□ -1.3
SMAD4-203ENST00000585448 NKTRP30414 1462 aaKnown RBP6.9□□□□□ -1.31
SMAD4-203ENST00000585448 HECW1Q76N89 1606 aa6.9□□□□□ -1.31
SMAD4-203ENST00000585448 PTPN23Q9H3S7 1636 aa6.9□□□□□ -1.31
SMAD4-203ENST00000585448 KIF21AQ7Z4S6 1674 aa6.9□□□□□ -1.31
SMAD4-203ENST00000585448 HMGB1P1B2RPK0 211 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 KIF5CO60282 957 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 OPA1O60313 960 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 DDAH1O94760 285 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 EZRP15311 586 aaKnown RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 VCAM1P19320 739 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 SESN3P58005 492 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 TUBB4BP68371 445 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 SLFN5Q08AF3 891 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 SERINC3Q13530 473 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ARHGAP29Q52LW3 1261 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 CDCA2Q69YH5 1023 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 CPLX2Q6PUV4 134 aaKnown RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 CYP2R1Q6VVX0 501 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 MICALCLQ6ZW33 695 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 LRP10Q7Z4F1 713 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ADAT2Q7Z6V5 191 aaKnown RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 CEP112Q8N8E3 955 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 C3orf20Q8ND61 904 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 SMCR8Q8TEV9 937 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 BICD1Q96G01 975 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 MRGPRX3Q96LB0 322 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 FGD4Q96M96 766 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 TRPV5Q9NQA5 729 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ERVK13-1Q9NX77 482 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 SIRPGQ9P1W8 387 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ORC3Q9UBD5 711 aaPredicted RBP6.89□□□□□ -1.31
SMAD4-203ENST00000585448 APEX2Q9UBZ4 518 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 EBF1Q9UH73 591 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 ZNF521Q96K83 1311 aa6.89□□□□□ -1.31
SMAD4-203ENST00000585448 PLXNC1O60486 1568 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 SAMD9Q5K651 1589 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 REREQ9P2R6 1566 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FADS2P1A8MWK0 482 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 B2RBV5 119 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 MEIS1O00470 390 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ERC2O15083 957 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FGF10O15520 208 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 SRGAP3O43295 1099 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CAPNS1P04632 268 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FESP07332 822 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 VDRP11473 427 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 NAT1P18440 290 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 MX1P20591 662 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 YY1P25490 414 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 RPL10P27635 214 aaKnown RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CEBPAP49715 358 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC38Q502W7 563 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 MFSD4BQ5TF39 518 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC181Q5TID7 509 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 WDR78Q5VTH9 848 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ZKSCAN2Q63HK3 967 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ISM2Q6H9L7 571 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 KCNV1Q6PIU1 500 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC80Q76M96 950 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 GET4Q7L5D6 327 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ZSWIM9Q86XI8 627 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FAM114A1Q8IWE2 563 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 TRIM59Q8IWR1 403 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 CCDC170Q8IYT3 715 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FAM81AQ8TBF8 368 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ZKSCAN4Q969J2 545 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 MRFAP1L1Q96HT8 127 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 FCRL3Q96P31 734 aaPredicted RBP6.88□□□□□ -1.31
SMAD4-203ENST00000585448 TRIM55Q9BYV6 548 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 UNC45AQ9H3U1 944 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 KIF9Q9HAQ2 790 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ATP6V0A4Q9HBG4 840 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 ARFGAP3Q9NP61 516 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 EXOC6BQ9Y2D4 811 aa6.88□□□□□ -1.31
SMAD4-203ENST00000585448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.88□□□□□ -1.311e-6■□□□□ 10.8
SMAD4-203ENST00000585448 AATKQ6ZMQ8 1374 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 A0A1W2PQ45 241 aaPredicted RBP6.87□□□□□ -1.31
SMAD4-203ENST00000585448 A0A1W2PQY0 241 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 GOLGA6L9A6NEM1 432 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 AURKAO14965 403 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 E2F6O75461 281 aa6.87□□□□□ -1.31
SMAD4-203ENST00000585448 TBC1D8O95759 1140 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms