RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 NLRP5P59047 1200 aa24.4■■□□□ 1.5
PPP4R1-228ENST00000584074 ANAPC15P60006 121 aa24.4■■□□□ 1.5
PPP4R1-228ENST00000584074 MARCH8Q5T0T0 291 aa24.4■■□□□ 1.5
PPP4R1-228ENST00000584074 DHX15O43143 795 aaKnown RBP24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 ATG7O95352 703 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 DEXIO95424 95 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 INSRRP14616 1297 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 IGBP1P78318 339 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 PLEKHG4Q58EX7 1191 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 CPLX2Q6PUV4 134 aaKnown RBP24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 ZBTB10Q96DT7 871 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 AIFM3Q96NN9 605 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 GAS2L1Q99501 681 aaPredicted RBP24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 TUBE1Q9UJT0 475 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 TPCN1Q9ULQ1 816 aa24.39■■□□□ 1.49
PPP4R1-228ENST00000584074 KIF28PB7ZC32 967 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 ARHGEF15O94989 841 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 STAT5BP51692 787 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 SCRN1Q12765 414 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 ADGRE1Q14246 886 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 PLCB4Q15147 1175 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 PRR16Q569H4 304 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 TAF2Q6P1X5 1199 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 PLPPR4Q7Z2D5 763 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 ZNF577Q9BSK1 485 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 TRPC6Q9Y210 931 aa24.38■■□□□ 1.49
PPP4R1-228ENST00000584074 MBLAC1A4D2B0 266 aaPredicted RBP24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 EDIL3O43854 480 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 TLL1O43897 1013 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 EFCAB14O75071 495 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 CIITAP33076 1130 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 SETQ01105 290 aaPredicted RBP24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 FAM26DQ5JW98 314 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 ABHD15Q6UXT9 468 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.37■■□□□ 1.498e-10■■■■■ 38.8
PPP4R1-228ENST00000584074 ZBED2Q9BTP6 218 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 PCDHA4Q9UN74 947 aa24.37■■□□□ 1.49
PPP4R1-228ENST00000584074 IGKV6D-21A0A0A0MT36 114 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 DTNBO60941 627 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 SEC24BO95487 1268 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 CHRNA1P02708 482 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 TAP1Q03518 808 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 RPAINQ86UA6 219 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 TRAPPC12Q8WVT3 735 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 DNAJB3Q8WWF6 145 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 SEPT8Q92599 483 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 LENG9Q96B70 501 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 SLKQ9H2G2 1235 aaPredicted RBP24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 CERS4Q9HA82 394 aa24.36■■□□□ 1.49
PPP4R1-228ENST00000584074 LCHNA4D1U4 455 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 RRN3P2A6NIE6 340 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 BACH1O14867 736 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 PFKFB2O60825 505 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 AK2P54819 239 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 MKRN4PQ13434 485 aaPredicted RBP24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 CCDC60Q8IWA6 550 aaPredicted RBP24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 USP38Q8NB14 1042 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 TBC1D22BQ9NU19 505 aa24.35■■□□□ 1.49
PPP4R1-228ENST00000584074 POTEB3A0JP26 581 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 GJB5O95377 273 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 IGFBP4P22692 258 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 NPY5RQ15761 445 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 FAM117BQ6P1L5 589 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 POTEBQ6S5H4 581 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 TBCKQ8TEA7 893 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 IL17RAQ96F46 866 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 FAM49AQ9H0Q0 323 aaPredicted RBP24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 TRANK1O15050 2925 aa24.34■■□□□ 1.49
PPP4R1-228ENST00000584074 CDKL5O76039 1030 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 SLC26A2P50443 739 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 USP11P51784 963 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 MGAT3Q09327 533 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 FAM160B1Q5W0V3 765 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 SWSAP1Q6NVH7 229 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 MIS18BP1Q6P0N0 1132 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 SPRED2Q7Z698 418 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 RSPH3Q86UC2 560 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 BLIDQ8IZY5 108 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 TNPO1Q92973 898 aaKnown RBP24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 RAD9AQ99638 391 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 KCNJ14Q9UNX9 436 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 PTPRSQ13332 1948 aa24.33■■□□□ 1.49
PPP4R1-228ENST00000584074 M0R2N6 131 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 RFXAPO00287 272 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 GHRP10912 638 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 ANKRD1Q15327 319 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 ZNF746Q6NUN9 644 aaPredicted RBP24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 PDXDC2PQ6P474 469 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 MYOCDQ8IZQ8 938 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 DAGLBQ8NCG7 672 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 PPM1EQ8WY54 764 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 IFIH1Q9BYX4 1025 aaKnown RBP24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 ZNF302Q9NR11 478 aa24.32■■□□□ 1.48
PPP4R1-228ENST00000584074 EPOPA6NHQ4 379 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 AMHP03971 560 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 LPIN1Q14693 890 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 NECAB1Q8N987 351 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 ATP8B4Q8TF62 1192 aa24.31■■□□□ 1.48
PPP4R1-228ENST00000584074 ARNTL2Q8WYA1 636 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms