RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 LETM2Q2VYF4 491 aa22.8■■□□□ 1.24
SS18-218ENST00000581021 MARCH8Q5T0T0 291 aa22.8■■□□□ 1.24
SS18-218ENST00000581021 FAM109BQ6ICB4 259 aaPredicted RBP22.8■■□□□ 1.24
SS18-218ENST00000581021 MOXD1Q6UVY6 613 aa22.8■■□□□ 1.24
SS18-218ENST00000581021 DIS3L2Q8IYB7 885 aaKnown RBP22.8■■□□□ 1.24
SS18-218ENST00000581021 TMX3Q96JJ7 454 aa22.8■■□□□ 1.24
SS18-218ENST00000581021 TBC1D22BQ9NU19 505 aa22.8■■□□□ 1.24
SS18-218ENST00000581021 CXXC1Q9P0U4 656 aaPredicted RBP22.8■■□□□ 1.24
SS18-218ENST00000581021 PPFIA1Q13136 1202 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 ZNF618Q5T7W0 954 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 ZNF746Q6NUN9 644 aaPredicted RBP22.79■■□□□ 1.24
SS18-218ENST00000581021 RUFY4Q6ZNE9 571 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 LRRC8DQ7L1W4 858 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 DEFB128Q7Z7B8 93 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 NEK8Q86SG6 692 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 AFAP1L1Q8TED9 768 aa22.79■■□□□ 1.24
SS18-218ENST00000581021 DDX25Q9UHL0 483 aaKnown RBP22.79■■□□□ 1.24
SS18-218ENST00000581021 TET1Q8NFU7 2136 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 PSMD10O75832 226 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 SELPP16109 830 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 ATP4AP20648 1035 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 STAT5BP51692 787 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 GRIK4Q16099 956 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 TCTN1Q2MV58 587 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 PSRC1Q6PGN9 363 aaPredicted RBP22.78■■□□□ 1.24
SS18-218ENST00000581021 B3GNT9Q6UX72 402 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 PLPPR4Q7Z2D5 763 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 RETREG2Q8NC44 543 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 TRAPPC12Q8WVT3 735 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 RIT2Q99578 217 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 OSBPL7Q9BZF2 842 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 UNC45AQ9H3U1 944 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 AZI2Q9H6S1 392 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 NRCAMQ92823 1304 aa22.78■■□□□ 1.24
SS18-218ENST00000581021 NBNO60934 754 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 INSRRP14616 1297 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 KRT76Q01546 638 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 LRCH2Q5VUJ6 765 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 SWSAP1Q6NVH7 229 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 OTOP2Q7RTS6 562 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 CCDC155Q8N6L0 562 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 KCNMB3Q9NPA1 279 aa22.77■■□□□ 1.24
SS18-218ENST00000581021 MBLAC1A4D2B0 266 aaPredicted RBP22.76■■□□□ 1.23
SS18-218ENST00000581021 BACH1O14867 736 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 CHMP2AO43633 222 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 GAS7O60861 476 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 THPOP40225 353 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 HMGN5P82970 282 aaKnown RBP22.76■■□□□ 1.23
SS18-218ENST00000581021 PPP4R3AQ6IN85 833 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 MIS18BP1Q6P0N0 1132 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 SMAP1Q8IYB5 467 aaPredicted RBP22.76■■□□□ 1.23
SS18-218ENST00000581021 HERVK_113Q902F9 699 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 C8orf76Q96K31 380 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 ZNF302Q9NR11 478 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 TRPC6Q9Y210 931 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 IGSF9BQ9UPX0 1349 aa22.76■■□□□ 1.23
SS18-218ENST00000581021 ZBTB42B2RXF5 422 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 CCNT1O60563 726 aaKnown RBP22.75■■□□□ 1.23
SS18-218ENST00000581021 RFC2P35250 354 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 IGBP1P78318 339 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 TRIM29Q14134 588 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 UGCGQ16739 394 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 FBXO18Q8NFZ0 1043 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 HAS1Q92839 578 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 TEKT3Q9BXF9 490 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 BRMS1Q9HCU9 246 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 TUBE1Q9UJT0 475 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 VAV3Q9UKW4 847 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 PCDHA10Q9Y5I2 948 aa22.75■■□□□ 1.23
SS18-218ENST00000581021 MAFBQ9Y5Q3 323 aaPredicted RBP22.75■■□□□ 1.23
SS18-218ENST00000581021 GRXCR1A8MXD5 290 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 WDR64B1ANS9 1081 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 ZNF862O60290 1169 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 FGBP02675 491 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 CTSHP09668 335 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 GNAT1P11488 350 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 PDXDC2PQ6P474 469 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 ATP8B4Q8TF62 1192 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 DISC1Q9NRI5 854 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 GABBR1Q9UBS5 961 aa22.74■■□□□ 1.23
SS18-218ENST00000581021 POTEB3A0JP26 581 aa22.73■■□□□ 1.23
SS18-218ENST00000581021 KIF28PB7ZC32 967 aa22.73■■□□□ 1.23
SS18-218ENST00000581021 CXCL10P02778 98 aa22.73■■□□□ 1.23
SS18-218ENST00000581021 GCFC2P16383 781 aaKnown RBP22.73■■□□□ 1.23
SS18-218ENST00000581021 FAM160B1Q5W0V3 765 aa22.73■■□□□ 1.23
SS18-218ENST00000581021 POTEBQ6S5H4 581 aa22.73■■□□□ 1.23
SS18-218ENST00000581021 RPUSD2Q8IZ73 545 aaKnown RBP22.73■■□□□ 1.23
SS18-218ENST00000581021 CDH23Q9H251 3354 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 EML1O00423 815 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 PSAPP07602 524 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 PFKMP08237 780 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 SLC26A2P50443 739 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 FAM184AQ8NB25 1140 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 IL27Q8NEV9 243 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 SIP14410 1827 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 WDR81Q562E7 1941 aa22.72■■□□□ 1.23
SS18-218ENST00000581021 RSPH10B2B2RC85 870 aa22.71■■□□□ 1.23
SS18-218ENST00000581021 SLC34A2O95436 690 aa22.71■■□□□ 1.23
SS18-218ENST00000581021 RSPH10BP0C881 870 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms