RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 SPATA33Q96N06 139 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 STRBPQ96SI9 672 aaKnown RBP9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 TCF25Q9BQ70 676 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 FOXQ1Q9C009 403 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 ARPP21Q9UBL0 812 aaPredicted RBP9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 WNT16Q9UBV4 365 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 SYNPO2Q9UMS6 1093 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 SIT1Q9Y3P8 196 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 SPEGQ15772 3267 aa9.38□□□□□ -0.91
PPP4R1-211ENST00000578875 CNOT1A5YKK6 2376 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MYH7BA7E2Y1 1941 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 TSPY3P0CV98 308 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 TSPY8P0CW00 308 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 SRGAP2BP0DMP2 458 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MTHFRP42898 656 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 RARSP54136 660 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 CSTF1Q05048 431 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 UBE3AQ05086 875 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 SLFN5Q08AF3 891 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MGAT3Q09327 533 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 STXBP2Q15833 593 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 TPRNQ4KMQ1 711 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 ATAT1Q5SQI0 421 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 FAM102BQ5T8I3 360 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 THNSL1Q8IYQ7 743 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 CLUAP1Q96AJ1 413 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 ZBTB10Q96DT7 871 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MPHOSPH6Q99547 160 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 BOLA2Q9H3K6 86 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MRS2Q9HD23 443 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 TYW1Q9NV66 732 aaKnown RBP9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 EXOC6BQ9Y2D4 811 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 PCDHB12Q9Y5F1 795 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 MRVI1Q9Y6F6 885 aa9.37□□□□□ -0.91
PPP4R1-211ENST00000578875 CAND2O75155 1236 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 GGPS1O95749 300 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 EIF2AK2P19525 551 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 RFX1P22670 979 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 PBX3P40426 434 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 FBXO47Q5MNV8 452 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 CELF3Q5SZQ8 465 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 TSSK4Q6SA08 328 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 BTNL9Q6UXG8 535 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 TMC5Q6UXY8 1006 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 NPAS4Q8IUM7 802 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 SLC44A3Q8N4M1 653 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 COLGALT1Q8NBJ5 622 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 SYTL5Q8TDW5 730 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 CASP10Q92851 521 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 EPB41L4AQ9HCS5 686 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 PAG1Q9NWQ8 432 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 STX8Q9UNK0 236 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 LHX6Q9UPM6 363 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 SMG5Q9UPR3 1016 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 USTQ9Y2C2 406 aa9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 MTF2Q9Y483 593 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-211ENST00000578875 CEP295Q9C0D2 2601 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 C2orf71A6NGG8 1288 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 TBKBP1A7MCY6 615 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 B4DLN1 442 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 N4BP1O75113 896 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 LGALS2P05162 132 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 MRPL12P52815 198 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 SHC2P98077 582 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 ARHGAP4P98171 946 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 UBE3CQ15386 1083 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 USH1GQ495M9 461 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 TMC7Q7Z402 723 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 TRIM50Q86XT4 487 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 GPR152Q8TDT2 470 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 NSUN6Q8TEA1 469 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 DNAJB3Q8WWF6 145 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 ATRIPQ8WXE1 791 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 RMDN3Q96TC7 470 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 CPVLQ9H3G5 476 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 CWH43Q9H720 699 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 ENTPD7Q9NQZ7 604 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 ASPMQ8IZT6 3477 aa9.35□□□□□ -0.91
PPP4R1-211ENST00000578875 UNC79Q9P2D8 2635 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 SRRM3A6NNA2 597 aaPredicted RBP9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 EIF3JO75822 258 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 NR3C2P08235 984 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 EPCAMP16422 314 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 SPINK2P20155 84 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 PDE12Q6L8Q7 609 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 KIAA1841Q6NSI8 718 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 XRRA1Q6P2D8 792 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 LRRC55Q6ZSA7 311 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 FAM9BQ8IZU0 186 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 MIER1Q8N108 512 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 MRPL43Q8N983 215 aaKnown RBP9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 ZBTB44Q8NCP5 570 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 NETO1Q8TDF5 533 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 LMBR1Q8WVP7 490 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 TMX1Q9H3N1 280 aa9.34□□□□□ -0.91
PPP4R1-211ENST00000578875 SPATA6Q9NWH7 488 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms