RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 EEPD1Q7L9B9 569 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 NT5C1BQ96P26 610 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-206ENST00000578373 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 CAPN11Q9UMQ6 739 aa13.06□□□□□ -0.32
ERBB2-206ENST00000578373 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ACTN3Q08043 901 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 RSAD2Q8WXG1 361 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 RGL1Q9NZL6 768 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 TXNDC9O14530 226 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 OSTNP61366 133 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 RAD54LQ92698 747 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 PPP1R3GB7ZBB8 358 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 MAN1A1P33908 653 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 DDX42Q86XP3 938 aaKnown RBP eCLIP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 TDRD3Q9H7E2 651 aaKnown RBP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 CHORDC1Q9UHD1 332 aaPredicted RBP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 PNPLA7Q6ZV29 1317 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ADAMTS13Q76LX8 1427 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 CD58P19256 250 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ERVK-24P63145 666 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 BFSP1Q12934 665 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 GRM4Q14833 912 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 CCDC38Q502W7 563 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 EARS2Q5JPH6 523 aaKnown RBP13.05□□□□□ -0.32
ERBB2-206ENST00000578373 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 ZNF408Q9H9D4 720 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 L2HGDHQ9H9P8 463 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 FAM114A2Q9NRY5 505 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 GGT7Q9UJ14 662 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 CLEC11AQ9Y240 323 aa13.05□□□□□ -0.32
ERBB2-206ENST00000578373 DAPK3O43293 454 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 NR3C1P04150 777 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 PEX3P56589 373 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 PTK2Q05397 1052 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 TROAPQ12815 778 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 DMP1Q13316 513 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-206ENST00000578373 QRICH1Q2TAL8 776 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 FAM47EQ6ZV65 393 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 DNAAF5Q86Y56 855 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 BANK1Q8NDB2 785 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 NEK9Q8TD19 979 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 KLHL29Q96CT2 875 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 RAB20Q9NX57 234 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 MYMKA6NI61 221 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 RASGRF2O14827 1237 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 SSTR3P32745 418 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ARHGAP4P98171 946 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 APBA1Q02410 837 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 TMED2Q15363 201 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 NUGGCQ68CJ6 796 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 LACRTQ9GZZ8 138 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 FHOD1Q9Y613 1164 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 SYNJ2BP-COX16A0A087WUM0 186 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ANO9A1A5B4 782 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 WTIPA6NIX2 430 aaPredicted RBP13.04□□□□□ -0.32
ERBB2-206ENST00000578373 LRRC14Q15048 493 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 SYDE2Q5VT97 1194 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ADGRF4Q8IZF3 695 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ARHGEF1Q92888 912 aaKnown RBP13.04□□□□□ -0.32
ERBB2-206ENST00000578373 VTI1AQ96AJ9 217 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 AZI2Q9H6S1 392 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 COX16Q9P0S2 106 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 PCDHB4Q9Y5E5 795 aa13.04□□□□□ -0.32
ERBB2-206ENST00000578373 ZBTB5O15062 677 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 HIP1RO75146 1068 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 BBOX1O75936 387 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 IGBP1P78318 339 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 PSMD2Q13200 908 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 CCDC62Q6P9F0 684 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 NACC1Q96RE7 527 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 MXD3Q9BW11 206 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 TMOD4Q9NZQ9 345 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 SEPT9Q9UHD8 586 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 SNX12Q9UMY4 172 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 NFIXQ14938 502 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 SNCBQ16143 134 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 CLEC4GQ6UXB4 293 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
ERBB2-206ENST00000578373 WHAMMQ8TF30 809 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 PPP1R16BQ96T49 567 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 ZMYND12Q9H0C1 365 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 CEP72Q9P209 647 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 A0A0U1RQJ8 604 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 BAG2O95816 211 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 MAGEA9P43362 315 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 ITIH3Q06033 890 aa13.03□□□□□ -0.32
ERBB2-206ENST00000578373 PASD1Q8IV76 773 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms