RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 BAZ2AQ9UIF9 1905 aaKnown RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 FRMPD2Q68DX3 1309 aaPredicted RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 XIRP1Q702N8 1843 aaKnown RBP5.96□□□□□ -1.45
VAPA-203ENST00000577539 CTAGE15A4D2H0 777 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 B4DLN1 442 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 H7C1D1 291 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CYTH3O43739 400 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CTAGE8P0CG41 777 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 PLCG1P19174 1290 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 ST13P50502 369 aaKnown RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 ERVK-24P63145 666 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 NONOQ15233 471 aaKnown RBP eCLIP5.96□□□□□ -1.46
VAPA-203ENST00000577539 MFSD14BQ5SR56 506 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 FAM196AQ6ZSG2 479 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CTAGE6Q86UF2 777 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CTAGE4Q8IX94 777 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 HPS3Q969F9 1004 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CCDC51Q96ER9 411 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 NAPGQ99747 312 aaPredicted RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 TRIM56Q9BRZ2 755 aaKnown RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 LIMA1Q9UHB6 759 aaKnown RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 CDC23Q9UJX2 597 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 TFR2Q9UP52 801 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 EPN1Q9Y6I3 576 aaPredicted RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 TTC26A0AVF1 554 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 SERTM1A2A2V5 107 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 ENC1O14682 589 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 OR52Z1P0C646 297 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CDK8P49336 464 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 PMS1P54277 932 aaKnown RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 CCDC122Q5T0U0 273 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 ALKBH2Q6NS38 261 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 DYMQ7RTS9 669 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 SRGAP1Q7Z6B7 1085 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 LRRC47Q8N1G4 583 aaKnown RBP5.96□□□□□ -1.46
VAPA-203ENST00000577539 CEP112Q8N8E3 955 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 OR8K1Q8NGG5 319 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 RABGGTAQ92696 567 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 KIFC2Q96AC6 838 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 IFT43Q96FT9 208 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CALML4Q96GE6 196 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 CAPZA3Q96KX2 299 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 PIGSQ96S52 555 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 TANGO6Q9C0B7 1094 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 TRIM10Q9UDY6 481 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 MAD2L2Q9UI95 211 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 HCN4Q9Y3Q4 1203 aa5.96□□□□□ -1.46
VAPA-203ENST00000577539 GOLGA8CPA6NN73 597 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 OAS2P29728 719 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 GNA11P29992 359 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 PLA2G4AP47712 749 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 PSMD2Q13200 908 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 GRAPQ13588 217 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TXNRD1Q16881 649 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CC2D1AQ6P1N0 951 aaPredicted RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 AMIGO3Q86WK7 504 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 GRAPLQ8TC17 118 aaPredicted RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 CAGE1Q8TC20 777 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TMA7Q9Y2S6 64 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 LEMD3Q9Y2U8 911 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 STXBP3O00186 592 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 MPHOSPH10O00566 681 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 SMC1AQ14683 1233 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.95□□□□□ -1.46
VAPA-203ENST00000577539 FAM43BQ6ZT52 329 aaPredicted RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 KRT25Q7Z3Z0 450 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CLEC10AQ8IUN9 316 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 ADSSL1Q8N142 457 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 MB21D1Q8N884 522 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TBCKQ8TEA7 893 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 COA7Q96BR5 231 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TRERF1Q96PN7 1200 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TUBGCP2Q9BSJ2 902 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 SLC39A2Q9NP94 309 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TMEM260Q9NX78 707 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 BARHL2Q9NY43 387 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CNTNAP4Q9C0A0 1308 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TAF1P21675 1872 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 MYH14Q7Z406 1995 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 ERLIN1O75477 346 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 FCER1AP12319 257 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 PBX1P40424 430 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 GYS2P54840 703 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 GPSM2P81274 684 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 TRIM14Q14142 442 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 LONRF2Q1L5Z9 754 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CCDC96Q2M329 555 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 FKBP15Q5T1M5 1219 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 NCAPH2Q6IBW4 605 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 NEK8Q86SG6 692 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 REXO1Q8N1G1 1221 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 MORC4Q8TE76 937 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CEP95Q96GE4 821 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 NOC4LQ9BVI4 516 aaKnown RBP5.95□□□□□ -1.46
VAPA-203ENST00000577539 ZHX3Q9H4I2 956 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 KANSL2Q9H9L4 492 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 CD209Q9NNX6 404 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 SH3GLB2Q9NR46 395 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 GGA1Q9UJY5 639 aa5.95□□□□□ -1.46
VAPA-203ENST00000577539 MACROD2A1Z1Q3 448 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms