RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 VPS13AQ96RL7 3174 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 FGF18O76093 207 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 GOLGA8HP0CJ92 632 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 PCP11498 1178 aaKnown RBP6.84□□□□□ -1.31
SMG6-219ENST00000575663 CD52P31358 61 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 MTHFRP42898 656 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 HSD17B4P51659 736 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 ADAM17P78536 824 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 RBM10P98175 930 aaKnown RBP6.84□□□□□ -1.31
SMG6-219ENST00000575663 PPFIA1Q13136 1202 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 PAK2Q13177 524 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 NEDD9Q14511 834 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 PGM5Q15124 567 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 QRICH1Q2TAL8 776 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 ASPRV1Q53RT3 343 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 SYCE2Q6PIF2 218 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 METTL7BQ6UX53 244 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 TRIM50Q86XT4 487 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 ADGRF4Q8IZF3 695 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 DTWD2Q8NBA8 298 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 TCF25Q9BQ70 676 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 UBA5Q9GZZ9 404 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 POMKQ9H5K3 350 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 NGRNQ9NPE2 291 aaKnown RBP6.84□□□□□ -1.31
SMG6-219ENST00000575663 TMEM260Q9NX78 707 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 TUBE1Q9UJT0 475 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 FBXL21Q9UKT6 434 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 LZTS1Q9Y250 596 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 CDY2AQ9Y6F7 541 aa6.84□□□□□ -1.31
SMG6-219ENST00000575663 ATG2AQ2TAZ0 1938 aa6.84□□□□□ -1.32
SMG6-219ENST00000575663 FSCN2O14926 492 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 STAM2O75886 525 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 ASGR2P07307 311 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 FGRP09769 529 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 LAG3P18627 525 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 PPM1AP35813 382 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 NT5C2P49902 561 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 MRPS6P82932 125 aaKnown RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 GHRHRQ02643 423 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 TRAF1Q13077 416 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 UTP14CQ5TAP6 766 aaKnown RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 IER5Q5VY09 327 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 TSHZ3Q63HK5 1081 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 FAM43BQ6ZT52 329 aaPredicted RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 CYFIP1Q7L576 1253 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 SIRT2Q8IXJ6 389 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 ZDHHC14Q8IZN3 488 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 MIER1Q8N108 512 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 SAMD3Q8N6K7 520 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 COLGALT1Q8NBJ5 622 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 LINC01599Q8WXQ3 324 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 MRPS27Q92552 414 aaKnown RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 GPR20Q99678 358 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 AMNQ9BXJ7 453 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 ADAM7Q9H2U9 754 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 SMOC2Q9H3U7 446 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 DBR1Q9UK59 544 aaKnown RBP6.83□□□□□ -1.32
SMG6-219ENST00000575663 USTQ9Y2C2 406 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 PCDHB7Q9Y5E2 793 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 SQORQ9Y6N5 450 aa6.83□□□□□ -1.32
SMG6-219ENST00000575663 SPTBN4Q9H254 2564 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 TBKBP1A7MCY6 615 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 TRIM6-TRIM34B2RNG4 842 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 STK25O00506 426 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 FIBPO43427 364 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 CA8P35219 290 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SARSP49591 514 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 ERVFC1P60507 584 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SP2Q02086 613 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SP4Q02446 784 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 KRT17Q04695 432 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 KCNC3Q14003 757 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 BMS1Q14692 1282 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 GRIK4Q16099 956 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 RSPO4Q2I0M5 234 aaPredicted RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 KIAA0319Q5VV43 1072 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 KIAA1841Q6NSI8 718 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 STOX1Q6ZVD7 989 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 VSIG10LQ86VR7 867 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 SIX5Q8N196 739 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 CRIPAKQ8N1N5 446 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 GPR161Q8N6U8 529 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 PNMA1Q8ND90 353 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 DNAJB3Q8WWF6 145 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 ESR2Q92731 530 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 GPKOWQ92917 476 aaPredicted RBP eCLIP6.82□□□□□ -1.32
SMG6-219ENST00000575663 TNPO1Q92973 898 aaKnown RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 ACSF2Q96CM8 615 aaPredicted RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 FAM49AQ9H0Q0 323 aaPredicted RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 CPVLQ9H3G5 476 aa6.82□□□□□ -1.32
SMG6-219ENST00000575663 RNF41Q9H4P4 317 aaPredicted RBP6.82□□□□□ -1.32
SMG6-219ENST00000575663 KAT14Q9H8E8 782 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms