RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 RBAK-RBAKDNI3L0D1 243 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 GJB5O95377 273 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 SEC24BO95487 1268 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 ARP10275 920 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 SREBF1P36956 1147 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 CCT2P78371 535 aaKnown RBP11□□□□□ -0.65
NPLOC4-216ENST00000574344 TAP1Q03518 808 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 TAF2Q6P1X5 1199 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 REXO1Q8N1G1 1221 aaKnown RBP11□□□□□ -0.65
NPLOC4-216ENST00000574344 IL27Q8NEV9 243 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 CCDC148Q8NFR7 591 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 CYP2W1Q8TAV3 490 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 SEPT8Q92599 483 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 SLC26A6Q9BXS9 759 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 PRDM6Q9NQX0 595 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 MTUS1Q9ULD2 1270 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 NID2Q14112 1375 aa11□□□□□ -0.65
NPLOC4-216ENST00000574344 BACH1O14867 736 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 PRPF3O43395 683 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 ARHGEF15O94989 841 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 UPP2O95045 317 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 GNA11P29992 359 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 RBM25P49756 843 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 CLK2P49760 499 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 ACTR2P61160 394 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 PLEKHG4Q58EX7 1191 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.99□□□□□ -0.655e-8■□□□□ 10.5
NPLOC4-216ENST00000574344 RUFY4Q6ZNE9 571 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 RUFY3Q7L099 469 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 PLA2G4DQ86XP0 818 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 BICD2Q8TD16 824 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 GDPD5Q8WTR4 605 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 SYMPKQ92797 1274 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 APBB2Q92870 758 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 TNPO1Q92973 898 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 RAD9AQ99638 391 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 IFIH1Q9BYX4 1025 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 FAM49AQ9H0Q0 323 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 AGO4Q9HCK5 861 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 CYP46A1Q9Y6A2 500 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 KIAA1671Q9BY89 1806 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 NFASCO94856 1347 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 VCANP13611 3396 aa10.99□□□□□ -0.65
NPLOC4-216ENST00000574344 ESYT2A0FGR8 921 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 EPOPA6NHQ4 379 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 M0QZ92 97 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 CPLX1O14810 134 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 GHRP10912 638 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 ADAM17P78536 824 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 SETQ01105 290 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 ITGB3BPQ13352 177 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 TJAP1Q5JTD0 557 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 FAM160B1Q5W0V3 765 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 SPRED2Q7Z698 418 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 TRIM22Q8IYM9 498 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 DNAJB3Q8WWF6 145 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 UIMC1Q96RL1 719 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 RNF26Q9BY78 433 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 UPF3BQ9BZI7 483 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 VPS54Q9P1Q0 977 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
NPLOC4-216ENST00000574344 LINC01553A4QN01 128 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 RRN3P2A6NIE6 340 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 MEIS1O00470 390 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 EPB41L2O43491 1005 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 INSRRP14616 1297 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 IFNAR1P17181 557 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 PDIA3P30101 505 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 STAT5BP51692 787 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 SSRP1Q08945 709 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 STK3Q13188 491 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 GRB10Q13322 594 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 PKN1Q16512 942 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 KRT40Q6A162 431 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 CPLX2Q6PUV4 134 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 NIPA1Q7RTP0 329 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 FBXL16Q8N461 479 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 RASGRP4Q8TDF6 673 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 TRAPPC12Q8WVT3 735 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 TGS1Q96RS0 853 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 PCYT2Q99447 389 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 ZNF577Q9BSK1 485 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 MTCH2Q9Y6C9 303 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 CDY2AQ9Y6F7 541 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
NPLOC4-216ENST00000574344 TTC3P53804 2025 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 POTEB3A0JP26 581 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 MBLAC1A4D2B0 266 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 FAM86B1E9PN63 330 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 CHRNA1P02708 482 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 RPLP2P05387 115 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 CYP3A4P08684 503 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 FAM86B2P0C5J1 330 aa10.96□□□□□ -0.65
NPLOC4-216ENST00000574344 NLRP5P59047 1200 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 364.8 ms