RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 C10orf76Q5T2E6 689 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 MCF2L2Q86YR7 1114 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 NT5C3AQ9H0P0 336 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 UBA6A0AVT1 1052 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 MYO1FO00160 1098 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 MEIS1O00470 390 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 HSPA8P11142 646 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 FBXW10Q5XX13 1052 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 GFM2Q969S9 779 aaKnown RBP17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 ARMCX3Q9UH62 379 aaPredicted RBP17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 KLF15Q9UIH9 416 aa17.04■□□□□ 0.32
CACNA1A-202ENST00000573710 ABCC11Q96J66 1382 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TRPC1P48995 793 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 FAM227BQ96M60 508 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 GOLGA8MH3BSY2 632 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 SNAP25P60880 206 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 CCNA1P78396 465 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 LAMC2Q13753 1193 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 ATP8A1Q9Y2Q0 1164 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 H0Y3Z8 333 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 SLC27A2O14975 620 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 RFX3P48380 749 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 PPP3CCP48454 512 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 RALGDSQ12967 914 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TRIM69Q86WT6 500 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 JPH2Q9BR39 696 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 GOLGA4Q13439 2230 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 RANBP1P43487 201 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 CEP85Q6P2H3 762 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 OR6B3Q8NGW1 331 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 A1BGP04217 495 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 SPDYE7PQ495Y7 208 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TMTC1Q8IUR5 882 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 KIFC3Q9BVG8 833 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 PASKQ96RG2 1323 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 PRPSAP2O60256 369 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 CUTAO60888 179 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TUBBP07437 444 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 NLRP12P59046 1061 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 FBXO18Q8NFZ0 1043 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 TMEM87BQ96K49 555 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 SERTAD1Q9UHV2 236 aa17.03■□□□□ 0.32
CACNA1A-202ENST00000573710 ADAM9Q13443 819 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 SGO2Q562F6 1265 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 SPDYAQ5MJ70 313 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 STAG2Q8N3U4 1231 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 ADNPQ9H2P0 1102 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 NEUROD4Q9HD90 331 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 STMN3Q9NZ72 180 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 FOSP01100 380 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 MYO1EQ12965 1108 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 TRIM42Q8IWZ5 723 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 SLFN12Q8IYM2 578 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 ATXN7L3BQ96GX2 97 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 ZNF212Q9UDV6 495 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 GDAQ9Y2T3 454 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
CACNA1A-202ENST00000573710 ARHGAP10A1A4S6 786 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 EPB42P16452 691 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 NFKBIAP25963 317 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 ATP6V0A4Q9HBG4 840 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 KIAA1024Q9UPX6 916 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 NBPF26B4DH59 902 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 KIAA1755Q5JYT7 1200 aa17.02■□□□□ 0.31
CACNA1A-202ENST00000573710 ICA1Q05084 483 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 TAS2R42Q7RTR8 314 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 UXS1Q8NBZ7 420 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 GPR1P46091 355 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 TTC23LQ6PF05 361 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 BTN2A1Q7KYR7 527 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 C10orf53Q8N6V4 93 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 SSTR3P32745 418 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 AARSP49588 968 aaKnown RBP eCLIP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 ITPRIPL1Q6GPH6 555 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 ZNF668Q96K58 619 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 USP26Q9BXU7 913 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 TRIM45Q9H8W5 580 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 ABCB5Q2M3G0 1257 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 KCNG1Q9UIX4 513 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 OR9Q1Q8NGQ5 310 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 ZNF215Q9UL58 517 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 TPCN1Q9ULQ1 816 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 ZNF394Q53GI3 561 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 LEMD2Q8NC56 503 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
CACNA1A-202ENST00000573710 SERBP1Q8NC51 408 aaKnown RBP eCLIP17■□□□□ 0.31
CACNA1A-202ENST00000573710 TMEM245Q9H330 911 aa17■□□□□ 0.31
CACNA1A-202ENST00000573710 SMARCAD1Q9H4L7 1026 aa17■□□□□ 0.31
CACNA1A-202ENST00000573710 ESRRAP11474 423 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms