RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SLURP2P0DP57 97 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 PCP11498 1178 aaKnown RBP15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 RANBP1P43487 201 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 ZNF268Q14587 947 aaPredicted RBP15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 NPY5RQ15761 445 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 SPICE1Q8N0Z3 855 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 RASGRP4Q8TDF6 673 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 EPAS1Q99814 870 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 ZCWPW1Q9H0M4 648 aa15.35■□□□□ 0.05
GTF3C1-203ENST00000562609 PPEF1O14829 653 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 LUC7L3O95232 432 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 PARP1P09874 1014 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 CALM1P0DP23 149 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 CALM2P0DP24 149 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 CALM3P0DP25 149 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 IL1R1P14778 569 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 TRIM21P19474 475 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 GSTO1P78417 241 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 PRCCQ92733 491 aaPredicted RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 PLCB1Q9NQ66 1216 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 RGL1Q9NZL6 768 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 KIAA1551Q9HCM1 1747 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 CFAP73A6NFT4 308 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 LGALS16A8MUM7 142 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 GSTA1P08263 222 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 HSD17B3P37058 310 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 HSPA9P38646 679 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 NLRP5P59047 1200 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 ANKRD20A2Q5SQ80 823 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 ANKRD20A1Q5TYW2 823 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 ANKRD20A3Q5VUR7 823 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 PIK3AP1Q6ZUJ8 805 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 ERICH1Q86X53 443 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 NOVA2Q9UNW9 492 aaKnown RBP15.34■□□□□ 0.05
GTF3C1-203ENST00000562609 DPPA5A6NC42 116 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 EVI5O60447 810 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 LDHCP07864 332 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 PAEPP09466 180 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 SCNN1DP51172 638 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 PPP2R5BQ15173 497 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CFAP221Q4G0U5 840 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 MAEAQ7L5Y9 396 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 ANKS4BQ8N8V4 417 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CCDC42Q96M95 316 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 IFIH1Q9BYX4 1025 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CEP131Q9UPN4 1083 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 A0A1W2PQC6 194 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 DCDC2CA8MYV0 355 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 MMP10P09238 476 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 SCG2P13521 617 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CCND1P24385 295 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 HOXA10P31260 410 aaPredicted RBP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CTNNA1P35221 906 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 GCLCP48506 637 aaPredicted RBP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 PPP4CP60510 307 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 KCNJ2P63252 427 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 ZNF844Q08AG5 666 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 HLTFQ14527 1009 aaKnown RBP eCLIP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 LRIG3Q6UXM1 1119 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 IRF2BP1Q8IU81 584 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CHMP6Q96FZ7 201 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 KRT12Q99456 494 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 CHCHD3Q9NX63 227 aaKnown RBP15.33■□□□□ 0.04
GTF3C1-203ENST00000562609 TRIM75PA6NK02 468 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 STXBP3O00186 592 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 COQ9O75208 318 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 ALADP13716 330 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 RASA1P20936 1047 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 DNA2P51530 1060 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 BIRC3Q13489 604 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 SLC35G1Q2M3R5 365 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 SYMPKQ92797 1274 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 FLT1P17948 1338 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 PLEKP08567 350 aaPredicted RBP15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 CDK8P49336 464 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 KLK7P49862 253 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 RHBDL3P58872 404 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 MAGOHP61326 146 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 USP4Q13107 963 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 TAF11Q15544 211 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 RUFY4Q6ZNE9 571 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 SPATA21Q7Z572 469 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 CLEC10AQ8IUN9 316 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 ZNF507Q8TCN5 953 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 MAGOHBQ96A72 148 aaKnown RBP15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 TMEM47Q9BQJ4 181 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 PIDD1Q9HB75 910 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 KCNMB3Q9NPA1 279 aa15.32■□□□□ 0.04
GTF3C1-203ENST00000562609 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 A0A1B0GVG6 124 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 H0YGN5 161 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 PYGBP11216 843 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 ALDH5A1P51649 535 aaPredicted RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 EIF6P56537 245 aaKnown RBP15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 MXRA7P84157 204 aa15.31■□□□□ 0.04
GTF3C1-203ENST00000562609 CHADLQ6NUI6 762 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms