RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SCLYQ96I15 445 aa17.91■□□□□ 0.46
RABGGTA-206ENST00000558649 CTAGE1Q96RT6 745 aa17.91■□□□□ 0.46
RABGGTA-206ENST00000558649 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
RABGGTA-206ENST00000558649 ZNF302Q9NR11 478 aa17.91■□□□□ 0.46
RABGGTA-206ENST00000558649 WDR81Q562E7 1941 aa17.91■□□□□ 0.46
RABGGTA-206ENST00000558649 WDR64B1ANS9 1081 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 PSMD10O75832 226 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 ATG7O95352 703 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 CSF2RAP15509 400 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 CUL4AQ13619 759 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 PDXDC2PQ6P474 469 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 NOSTRINQ8IVI9 506 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 CCDC155Q8N6L0 562 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 LMBR1Q8WVP7 490 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 WNT8AQ9H1J5 351 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 DISC1Q9NRI5 854 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 PCDHA10Q9Y5I2 948 aa17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 MYH9P35579 1960 aaKnown RBP17.9■□□□□ 0.46
RABGGTA-206ENST00000558649 SCN5AQ14524 2016 aa17.89■□□□□ 0.46
RABGGTA-206ENST00000558649 KAT6AQ92794 2004 aa17.89■□□□□ 0.46
RABGGTA-206ENST00000558649 TREHO43280 583 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 NEMFO60524 1076 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 GNAT1P11488 350 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 MCM7P33993 719 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 BFSP2Q13515 415 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 PLCB4Q15147 1175 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 GRIK4Q16099 956 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 PLPPR4Q7Z2D5 763 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 MIER3Q7Z3K6 550 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 HSCBQ8IWL3 235 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 RETREG2Q8NC44 543 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 DHX38Q92620 1227 aaKnown RBP17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 WNT8BQ93098 351 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 PRO3102Q9H379 93 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 KCNMB3Q9NPA1 279 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 GABBR1Q9UBS5 961 aa17.89■□□□□ 0.45
RABGGTA-206ENST00000558649 IGKV6D-21A0A0A0MT36 114 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 POTEB3A0JP26 581 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 BAG4O95429 457 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 ACRP10323 421 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 INSRRP14616 1297 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 SFNP31947 248 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 BMP8BP34820 402 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 JAK3P52333 1124 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 EPHB4P54760 987 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 PTK7Q13308 1070 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 PPIGQ13427 754 aaKnown RBP eCLIP17.88■□□□□ 0.451e-7■■□□□ 13.8
RABGGTA-206ENST00000558649 CALCRLQ16602 461 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 LARP1BQ659C4 914 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 POTEBQ6S5H4 581 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 TDHQ8IZJ6 230 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 TRAPPC12Q8WVT3 735 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 HAS1Q92839 578 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 FAM20AQ96MK3 541 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 NOL7Q9UMY1 257 aaKnown RBP17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 NRCAMQ92823 1304 aa17.88■□□□□ 0.45
RABGGTA-206ENST00000558649 HOXC8P31273 242 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 THPOP40225 353 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 NBR1Q14596 966 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 ZNF174Q15697 407 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 HABP4Q5JVS0 413 aaKnown RBP17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 C9orf50Q5SZB4 431 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 NCAPH2Q6IBW4 605 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 DEFB128Q7Z7B8 93 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 SERINC5Q86VE9 423 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 CAGE1Q8TC20 777 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 AFAP1L1Q8TED9 768 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 ZBTB10Q96DT7 871 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 TUBE1Q9UJT0 475 aa17.87■□□□□ 0.45
RABGGTA-206ENST00000558649 VPS37CA5D8V6 355 aaPredicted RBP17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 RBAK-RBAKDNI3L0D1 243 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 PITPNM1O00562 1244 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 TBX3O15119 743 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 CKBP12277 381 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 U2AF2P26368 475 aaKnown RBP eCLIP17.86■□□□□ 0.452e-6■■■□□ 18.7
RABGGTA-206ENST00000558649 SLC26A2P50443 739 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 UGCGQ16739 394 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 TTC38Q5R3I4 469 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 RUFY4Q6ZNE9 571 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 SLFN12Q8IYM2 578 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 SNX21Q969T3 373 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 VAV3Q9UKW4 847 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 IGSF9BQ9UPX0 1349 aa17.86■□□□□ 0.45
RABGGTA-206ENST00000558649 CTSHP09668 335 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 IQCF3P0C7M6 154 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 SELPP16109 830 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 TXKP42681 527 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 PRKCEQ02156 737 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 PPP2R5CQ13362 524 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 SHHQ15465 462 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 ZNF618Q5T7W0 954 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 LRRC8DQ7L1W4 858 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 ATP8B4Q8TF62 1192 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 TNPO1Q92973 898 aaKnown RBP17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 IL23AQ9NPF7 189 aa17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 MAFBQ9Y5Q3 323 aaPredicted RBP17.85■□□□□ 0.45
RABGGTA-206ENST00000558649 RRN3P2A6NIE6 340 aa17.84■□□□□ 0.45
RABGGTA-206ENST00000558649 EML1O00423 815 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms