RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 HCFC2Q9Y5Z7 792 aa8.55□□□□□ -1.04
LEMD3-206ENST00000545026 RASSF10A6NK89 507 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 NUDT19A8MXV4 375 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 IARSP41252 1262 aaKnown RBP8.54□□□□□ -1.04
LEMD3-206ENST00000545026 FNTBP49356 437 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 GRIN1Q05586 938 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 KLF1Q13351 362 aaPredicted RBP8.54□□□□□ -1.04
LEMD3-206ENST00000545026 ABCB5Q2M3G0 1257 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 TSPAN17Q96FV3 270 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 INTS4Q96HW7 963 aaKnown RBP8.54□□□□□ -1.04
LEMD3-206ENST00000545026 ZDHHC5Q9C0B5 715 aa8.54□□□□□ -1.04
LEMD3-206ENST00000545026 NOC2LQ9Y3T9 749 aaKnown RBP8.54□□□□□ -1.04
LEMD3-206ENST00000545026 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.53□□□□□ -1.04
LEMD3-206ENST00000545026 LCHNA4D1U4 455 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 FOXP2O15409 715 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 AKAP10O43572 662 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 PRR5P85299 388 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 SLC9A5Q14940 896 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 RAB3GAP1Q15042 981 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 EPHA7Q15375 998 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 PAN2Q504Q3 1202 aaKnown RBP8.53□□□□□ -1.04
LEMD3-206ENST00000545026 ADGRF1Q5T601 910 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 CMIPQ8IY22 773 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 ZZZ3Q8IYH5 903 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 HOOK2Q96ED9 719 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 KRTAP4-6Q9BYQ5 205 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 KLHL14Q9P2G3 628 aa8.53□□□□□ -1.04
LEMD3-206ENST00000545026 DBR1Q9UK59 544 aaKnown RBP8.53□□□□□ -1.04
LEMD3-206ENST00000545026 SHTN1A0MZ66 631 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 PRAMEF25A6NGN4 478 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 FZD9O00144 591 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 FAHP16930 419 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 CD40P25942 277 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 MAPKAPK2P49137 400 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
LEMD3-206ENST00000545026 HERVK_113P62684 666 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 PDCD1Q15116 288 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 CBLL1Q75N03 491 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 ZBTB46Q86UZ6 589 aa8.52□□□□□ -1.05
LEMD3-206ENST00000545026 FUBP3Q96I24 572 aaKnown RBP eCLIP8.52□□□□□ -1.05
LEMD3-206ENST00000545026 MMEP08473 750 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 MYBL2P10244 700 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 LRRC41Q15345 812 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 RGL3Q3MIN7 710 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 PLEKHN1Q494U1 663 aaPredicted RBP8.51□□□□□ -1.05
LEMD3-206ENST00000545026 CCDC181Q5TID7 509 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 FRMD7Q6ZUT3 714 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 ATG4DQ86TL0 474 aaPredicted RBP8.51□□□□□ -1.05
LEMD3-206ENST00000545026 LMBR1Q8WVP7 490 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 ASB15Q8WXK1 588 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
LEMD3-206ENST00000545026 TSR2Q969E8 191 aaKnown RBP8.51□□□□□ -1.05
LEMD3-206ENST00000545026 ZNF496Q96IT1 587 aaPredicted RBP8.51□□□□□ -1.05
LEMD3-206ENST00000545026 SLC6A17Q9H1V8 727 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 BCAS3Q9H6U6 928 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 AASDHPPTQ9NRN7 309 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
LEMD3-206ENST00000545026 OR14I1A6ND48 311 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 TSPAN6O43657 245 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 MT-CO1P00395 513 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 TMEM253P0C7T8 217 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 SCAND1P57086 179 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 YBX1P67809 324 aaKnown RBP8.5□□□□□ -1.05
LEMD3-206ENST00000545026 PIN1Q13526 163 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-206ENST00000545026 PPP2R5AQ15172 486 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 PTPN21Q16825 1174 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 NOL8Q76FK4 1167 aaKnown RBP8.5□□□□□ -1.05
LEMD3-206ENST00000545026 MIB1Q86YT6 1006 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 C1orf162Q8NEQ5 155 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-206ENST00000545026 FOXRED1Q96CU9 486 aaPredicted RBP8.5□□□□□ -1.05
LEMD3-206ENST00000545026 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 SLC13A1Q9BZW2 595 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 ZIM2Q9NZV7 527 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 FAN1Q9Y2M0 1017 aa8.5□□□□□ -1.05
LEMD3-206ENST00000545026 GOLGA8AA7E2F4 631 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 GOLGA8BA8MQT2 603 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 KDM1AO60341 852 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 LRG1P02750 347 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 ADCY1Q08828 1119 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 ARTNQ5T4W7 220 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 RTN4RL1Q86UN2 441 aaPredicted RBP8.49□□□□□ -1.05
LEMD3-206ENST00000545026 NME9Q86XW9 330 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 FAM126BQ8IXS8 530 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 FAXDC2Q96IV6 333 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 RTFDC1Q9BY42 306 aaPredicted RBP8.49□□□□□ -1.05
LEMD3-206ENST00000545026 CDH19Q9H159 772 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 DTLQ9NZJ0 730 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 HSPBP1Q9NZL4 362 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 BTBD7Q9P203 1132 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 USP36Q9P275 1121 aaKnown RBP8.49□□□□□ -1.05
LEMD3-206ENST00000545026 MSRAQ9UJ68 235 aa8.49□□□□□ -1.05
LEMD3-206ENST00000545026 E2F8A0AVK6 867 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 ABLIM3O94929 683 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 SCGB1D2O95969 90 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 RBP3P10745 1247 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 AOAHP28039 575 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 PDE6BP35913 854 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 GPR3P46089 330 aa8.48□□□□□ -1.05
LEMD3-206ENST00000545026 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms