RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PPP2R3BQ9Y5P8 575 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 ZNF263O14978 683 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 PHACTR2O75167 634 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 AMPD2Q01433 879 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 FBXO11Q86XK2 927 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 AFAP1L1Q8TED9 768 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 KAT2BQ92831 832 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 HOOK2Q96ED9 719 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 CAPZA3Q96KX2 299 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 AK8Q96MA6 479 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 AMNQ9BXJ7 453 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 PLEKHA4Q9H4M7 779 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 FAM207AQ9NSI2 230 aaPredicted RBP16.54■□□□□ 0.24
CHFR-223ENST00000544268 FBXO28Q9NVF7 368 aa16.54■□□□□ 0.24
CHFR-223ENST00000544268 SMCHD1A6NHR9 2005 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 ZNF185O15231 689 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 CLK2P49760 499 aaKnown RBP16.53■□□□□ 0.24
CHFR-223ENST00000544268 VSNL1P62760 191 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 APBA1Q02410 837 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 CCDC122Q5T0U0 273 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 SCYL3Q8IZE3 742 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 DHTKD1Q96HY7 919 aaPredicted RBP16.53■□□□□ 0.24
CHFR-223ENST00000544268 GINM1Q9NU53 330 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 PITPNM2Q9BZ72 1349 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 DOCK1Q14185 1865 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 NPHP3-ACAD11A0A0J9YXS1 232 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 CCDC189A1A4V9 331 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 AARSP49588 968 aaKnown RBP eCLIP16.53■□□□□ 0.24
CHFR-223ENST00000544268 MRPL12P52815 198 aaKnown RBP16.53■□□□□ 0.24
CHFR-223ENST00000544268 TRIM14Q14142 442 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 DPY19L2Q6NUT2 758 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 HAS1Q92839 578 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 VIPAS39Q9H9C1 493 aa16.53■□□□□ 0.24
CHFR-223ENST00000544268 NHEJ1Q9H9Q4 299 aaPredicted RBP16.53■□□□□ 0.24
CHFR-223ENST00000544268 A0A1W2PQC6 194 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 MACROD2A1Z1Q3 448 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 DNM2P50570 870 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 PRKG1Q13976 671 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 CHURC1Q8WUH1 139 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 LARP4BQ92615 738 aaKnown RBP16.52■□□□□ 0.24
CHFR-223ENST00000544268 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 CALML4Q96GE6 196 aa16.52■□□□□ 0.24
CHFR-223ENST00000544268 ADM5C9JUS6 153 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 RNF40O75150 1001 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 MTMR2Q13614 643 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 DDX12PQ92771 950 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 TACO1Q9BSH4 297 aaKnown RBP16.51■□□□□ 0.23
CHFR-223ENST00000544268 MYO6Q9UM54 1294 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 ZMYND10O75800 440 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 SSBP05455 408 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHFR-223ENST00000544268 PTPRAP18433 802 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 SPP2Q13103 211 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 SUPT20HL1Q3ZLR7 823 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
CHFR-223ENST00000544268 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 P2RX7Q99572 595 aaKnown RBP16.51■□□□□ 0.23
CHFR-223ENST00000544268 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 FEM1BQ9UK73 627 aa16.51■□□□□ 0.23
CHFR-223ENST00000544268 LRRIQ3A6PVS8 624 aaPredicted RBP16.5■□□□□ 0.23
CHFR-223ENST00000544268 PLA2G6O60733 806 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 PRPF6O94906 941 aaKnown RBP16.5■□□□□ 0.23
CHFR-223ENST00000544268 MYL1P05976 194 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 STAT3P40763 770 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 MRPS25P82663 173 aaKnown RBP16.5■□□□□ 0.23
CHFR-223ENST00000544268 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 L3MBTL3Q96JM7 780 aaPredicted RBP16.5■□□□□ 0.23
CHFR-223ENST00000544268 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 LIG3P49916 1009 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 MEA1Q16626 185 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 FAM160B2Q86V87 743 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 SULF1Q8IWU6 871 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 LPAR1Q92633 364 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
CHFR-223ENST00000544268 CUEDC2Q9H467 287 aa16.5■□□□□ 0.23
CHFR-223ENST00000544268 E9PMD0 336 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 MEIS2O14770 477 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 OPLAHO14841 1288 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 SHOX2O60902 331 aaPredicted RBP16.49■□□□□ 0.23
CHFR-223ENST00000544268 SYF2O95926 243 aaKnown RBP16.49■□□□□ 0.23
CHFR-223ENST00000544268 CENPPQ6IPU0 288 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 KCNV1Q6PIU1 500 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 KIAA1328Q86T90 577 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 RAD54LQ92698 747 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
CHFR-223ENST00000544268 A1CFQ9NQ94 594 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms