RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 MBTPS2O43462 519 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 LGALS2P05162 132 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 RB1P06400 928 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 BMPR1AP36894 532 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 EXOSC10Q01780 885 aaKnown RBP13.63□□□□□ -0.23
GABPB1-206ENST00000543881 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 METTL7BQ6UX53 244 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 CYFIP1Q7L576 1253 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 RNF135Q8IUD6 432 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 CUL5Q93034 780 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 SNX27Q96L92 541 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 GPR20Q99678 358 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 LMAN2LQ9H0V9 348 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 TRIOO75962 3097 aa13.63□□□□□ -0.23
GABPB1-206ENST00000543881 GRM6O15303 877 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 LINC00271P0C7V0 271 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 NEDD9Q14511 834 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 UBE2SQ16763 222 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 APOA5Q6Q788 366 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 MICU3Q86XE3 530 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 TRIM50Q86XT4 487 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 NEK1Q96PY6 1258 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 PHOX2BQ99453 314 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 C11orf84Q9BUA3 381 aaPredicted RBP13.62□□□□□ -0.23
GABPB1-206ENST00000543881 PSTPIP2Q9H939 334 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 SETD4Q9NVD3 440 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 BRPF3Q9ULD4 1205 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 RWDD3Q9Y3V2 267 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 TECTAO75443 2155 aa13.62□□□□□ -0.23
GABPB1-206ENST00000543881 STXBP3O00186 592 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 NOP56O00567 594 aaKnown RBP13.61□□□□□ -0.23
GABPB1-206ENST00000543881 ATP9AO75110 1047 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 GNAT1P11488 350 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 ITGB5P18084 799 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 FUT2Q10981 343 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 SMAD4Q13485 552 aaKnown RBP13.61□□□□□ -0.23
GABPB1-206ENST00000543881 TSGA10IPQ3SY00 556 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 XRRA1Q6P2D8 792 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 EDAQ92838 391 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 IGFLR1Q9H665 355 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 ADGRA3Q8IWK6 1321 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 CNTNAP5Q8WYK1 1306 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 TBX10O75333 385 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 CDC45O75419 566 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 CSPG5O95196 566 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 GTF2F1P35269 517 aaKnown RBP eCLIP13.61□□□□□ -0.23
GABPB1-206ENST00000543881 FAM26DQ5JW98 314 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 TYW1BQ6NUM6 668 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 DHX32Q7L7V1 743 aaKnown RBP13.61□□□□□ -0.23
GABPB1-206ENST00000543881 PRSS33Q8NF86 280 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 SENP7Q9BQF6 1050 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 USP26Q9BXU7 913 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 CD207Q9UJ71 328 aa13.61□□□□□ -0.23
GABPB1-206ENST00000543881 LINC01565O15544 149 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 KCNA2P16389 499 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 SP4Q02446 784 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 IER5LQ5T953 404 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 UTP14CQ5TAP6 766 aaKnown RBP13.6□□□□□ -0.23
GABPB1-206ENST00000543881 WWC2Q6AWC2 1192 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 HEATR3Q7Z4Q2 680 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 BMP8AQ7Z5Y6 402 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
GABPB1-206ENST00000543881 FAM217BQ9NTX9 383 aaPredicted RBP13.6□□□□□ -0.23
GABPB1-206ENST00000543881 PCDHA6Q9UN73 950 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 PCDHA8Q9Y5H6 950 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 UBIAD1Q9Y5Z9 338 aa13.6□□□□□ -0.23
GABPB1-206ENST00000543881 TMEM221A6NGB7 291 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 M0R296 226 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 CHRNA1P02708 482 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 GHRP10912 638 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 CPA1P15085 419 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 PTPN5P54829 565 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 ADAM17P78536 824 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 ARHGAP4P98171 946 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 ADAM15Q13444 863 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 TRIM67Q6ZTA4 783 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 PBXIP1Q96AQ6 731 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 GPRASP2Q96D09 838 aa13.59□□□□□ -0.23
GABPB1-206ENST00000543881 RC3H2Q9HBD1 1191 aaKnown RBP13.59□□□□□ -0.23
GABPB1-206ENST00000543881 ALG13Q9NP73 1137 aaKnown RBP13.59□□□□□ -0.23
GABPB1-206ENST00000543881 KAT6AQ92794 2004 aa13.58□□□□□ -0.23
GABPB1-206ENST00000543881 GSTTP1A0A1W2PQM5 241 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 ZBTB43O43298 467 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 MMP1P03956 469 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 CDC27P30260 824 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 NDUFV1P49821 464 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 CAMK1Q14012 370 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 BTG3Q14201 252 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-206ENST00000543881 RTN1Q16799 776 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 KCNB2Q92953 911 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 MSLNLQ96KJ4 702 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 PLVAPQ9BX97 442 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 RBM28Q9NW13 759 aaKnown RBP13.58□□□□□ -0.24
GABPB1-206ENST00000543881 ZNF215Q9UL58 517 aaPredicted RBP13.58□□□□□ -0.24
GABPB1-206ENST00000543881 PLAGL2Q9UPG8 496 aa13.58□□□□□ -0.24
GABPB1-206ENST00000543881 V9GY48 417 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms