RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 TCEAL9Q9UHQ7 104 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 KIAA1217Q5T5P2 1943 aa10.37□□□□□ -0.75
GNE-206ENST00000543356 A0A1B0GTH6 734 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 WDR64B1ANS9 1081 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 PEX10O60683 326 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 RGS20O76081 388 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 CELF2O95319 508 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 P4HBP07237 508 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 ZBTB48P10074 688 aaPredicted RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 KCNA2P16389 499 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ERCC3P19447 782 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 EDNRBP24530 442 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 CCDC144BQ3MJ40 725 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 FAM26FQ5R3K3 315 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 CENPPQ6IPU0 288 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ZNF746Q6NUN9 644 aaPredicted RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 CCDC186Q7Z3E2 898 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ANKRD23Q86SG2 305 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 HPS3Q969F9 1004 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 MROH8Q9H579 483 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ZSWIM4Q9H7M6 989 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 TXNRD2Q9NNW7 524 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 INTS13Q9NVM9 706 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ADD3Q9UEY8 706 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ASTN1O14525 1302 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 NPHP3-ACAD11A0A0J9YXS1 232 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 TRIM49BA6NDI0 452 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 SPATA31C2B4DYI2 1134 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 POTEB2H3BUK9 544 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 ATP9AO75110 1047 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 PTGS1P23219 599 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 MSNP26038 577 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 ICAM3P32942 547 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 GSDMDP57764 484 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 STXBP2Q15833 593 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 VSTM4Q8IW00 320 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 FAM133AQ8N9E0 248 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 DUSP9Q99956 384 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 REEP2Q9BRK0 252 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 WRAP73Q9P2S5 460 aaPredicted RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 NRBP1Q9UHY1 535 aa10.36□□□□□ -0.75
GNE-206ENST00000543356 R3HCC1Q9Y3T6 440 aaKnown RBP10.36□□□□□ -0.75
GNE-206ENST00000543356 EEF1GP26641 437 aaKnown RBP10.35□□□□□ -0.75
GNE-206ENST00000543356 CNTN2Q02246 1040 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 LRRC63Q05C16 580 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 NR1I3Q14994 352 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 HSP90AA4PQ58FG1 418 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 TCP11X2Q5H9J9 407 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 RINT1Q6NUQ1 792 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 TMC6Q7Z403 805 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 MYOCDQ8IZQ8 938 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 BANK1Q8NDB2 785 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 ANKRD20A12PQ8NF67 263 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 RUSC1Q9BVN2 902 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 CCDC94Q9BW85 323 aaPredicted RBP10.35□□□□□ -0.75
GNE-206ENST00000543356 KCNF1Q9H3M0 494 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 NMRK2Q9NPI5 230 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 DBR1Q9UK59 544 aaKnown RBP10.35□□□□□ -0.75
GNE-206ENST00000543356 CCL15-CCL14A0A0B4J2E2 113 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 SOWAHBA6NEL2 793 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 LRRC10BA6NIK2 292 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 B4DLN1 442 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 KCNJ18B7U540 433 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 COBLO75128 1261 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 CCNE2O96020 404 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 GAP43P17677 238 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 QARSP47897 775 aaKnown RBP10.35□□□□□ -0.75
GNE-206ENST00000543356 ERVK-9P63128 1117 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 ERVK-24P63145 666 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 KCNJ12Q14500 433 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 CCL15Q16663 113 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 SPRYD7Q5W111 196 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 ANKRD40Q6AI12 368 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 C1orf186Q6ZWK4 172 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 PIGOQ8TEQ8 1089 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 MPHOSPH6Q99547 160 aaKnown RBP10.35□□□□□ -0.75
GNE-206ENST00000543356 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
GNE-206ENST00000543356 DNAJC25-GNG10A0A024R161 153 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 UQCRHLA0A096LP55 91 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 LOC102724159A0A0B4J2E5 919 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 PDHXO00330 501 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 TBCAO75347 108 aaKnown RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 UQCRHP07919 91 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 PWP2Q15269 919 aaKnown RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 KRT31Q15323 416 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 FILIP1LQ4L180 1135 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 HERC4Q5GLZ8 1057 aaPredicted RBP10.34□□□□□ -0.75
GNE-206ENST00000543356 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 IRF2BP1Q8IU81 584 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 FAM114A1Q8IWE2 563 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 C4orf19Q8IY42 314 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 CSGALNACT2Q8N6G5 542 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 CCDC150Q8NCX0 1101 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 BRI3BPQ8WY22 251 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 MMP19Q99542 508 aa10.34□□□□□ -0.75
GNE-206ENST00000543356 ODF2LQ9ULJ1 636 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms