RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 NAP1L1P55209 391 aaKnown RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 RETREG2Q8NC44 543 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 MSANTD4Q8NCY6 345 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 PACSIN1Q9BY11 444 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 MYO1AQ9UBC5 1043 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 L1RE1Q9UN81 338 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 SHTN1A0MZ66 631 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 GCFC2P16383 781 aaKnown RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 CASP4P49662 377 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 RNASE9P60153 205 aaKnown RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 RAPGEF1Q13905 1077 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 GIT2Q14161 759 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 HGSNATQ68CP4 663 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 CCDC65Q8IXS2 484 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 CRYGNQ8WXF5 182 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 SH2D3AQ9BRG2 576 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 TMEM39BQ9GZU3 492 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
DDX55-209ENST00000542286 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
DDX55-209ENST00000542286 SLC9A1P19634 815 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 NR2F2P24468 414 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 PDXDC1Q6P996 788 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 FAM133AQ8N9E0 248 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 WDR18Q9BV38 432 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDX55-209ENST00000542286 MAGEA1P43355 309 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
DDX55-209ENST00000542286 GJB7Q6PEY0 223 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 TEX2Q8IWB9 1127 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 CCDC170Q8IYT3 715 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 PPM1EQ8WY54 764 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 MS4A14Q96JA4 679 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.27■□□□□ 0.2
DDX55-209ENST00000542286 NT5C3AQ9H0P0 336 aa16.27■□□□□ 0.2
DDX55-209ENST00000542286 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 DDX39AO00148 427 aaKnown RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 ERLIN1O75477 346 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 USP11P51784 963 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 CORO7P57737 925 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 SLC7A5Q01650 507 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 ZC2HC1CQ53FD0 456 aaPredicted RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 PAPD7Q5XG87 772 aaKnown RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 LRRC31Q6UY01 552 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 RAB21Q9UL25 225 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 MAEAQ7L5Y9 396 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 TPH2Q8IWU9 490 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 RIN2Q8WYP3 895 aaPredicted RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 CCDC102AQ96A19 550 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 SH2D4AQ9H788 454 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 SERPINA10Q9UK55 444 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 KDM3AQ9Y4C1 1321 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 PLS1Q14651 629 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 HYIQ5T013 277 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 TCERG1LQ5VWI1 586 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 C7orf43Q8WVR3 580 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 NCAPGQ9BPX3 1015 aa16.26■□□□□ 0.19
DDX55-209ENST00000542286 AJAP1Q9UKB5 411 aaPredicted RBP16.26■□□□□ 0.19
DDX55-209ENST00000542286 PLSCR1O15162 318 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 NMT1P30419 496 aaKnown RBP16.25■□□□□ 0.19
DDX55-209ENST00000542286 PPP1R2P41236 205 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 KCNH2Q12809 1159 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 PSMD2Q13200 908 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 COG2Q14746 738 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 HSP90B2PQ58FF3 399 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 TRIM59Q8IWR1 403 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 WRAP73Q9P2S5 460 aaPredicted RBP16.25■□□□□ 0.19
DDX55-209ENST00000542286 ADAMTS1Q9UHI8 967 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 VAV3Q9UKW4 847 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 FTCDO95954 541 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 CASP8Q14790 479 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 MSL3Q8N5Y2 521 aaKnown RBP16.25■□□□□ 0.19
DDX55-209ENST00000542286 PURBQ96QR8 312 aaKnown RBP16.25■□□□□ 0.19
DDX55-209ENST00000542286 EIF2AK1Q9BQI3 630 aaKnown RBP16.25■□□□□ 0.19
DDX55-209ENST00000542286 DNM3Q9UQ16 869 aa16.25■□□□□ 0.19
DDX55-209ENST00000542286 CYP3A7-CYP3A51PA0A087WV96 503 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 POTEB2H3BUK9 544 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 AKAP3O75969 853 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 GCNT3O95395 438 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 CYP3A7P24462 503 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 SREBF1P36956 1147 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 USP14P54578 494 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 MYCBPQ99417 103 aaPredicted RBP16.24■□□□□ 0.19
DDX55-209ENST00000542286 PCDHB13Q9Y5F0 798 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 A0A087X0T9 212 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 FAM228BP0C875 321 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 EPS15P42566 896 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 SEMA3FQ13275 785 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 CREG2Q8IUH2 290 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 DYDC2Q96IM9 177 aa16.24■□□□□ 0.19
DDX55-209ENST00000542286 FGFR1OPO95684 399 aaKnown RBP16.23■□□□□ 0.19
DDX55-209ENST00000542286 HNRNPH3P31942 346 aaKnown RBP16.23■□□□□ 0.19
DDX55-209ENST00000542286 ASTE1Q2TB18 679 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms