RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 SMIM10L2AP0DMW4 78 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 SMIM10L2BP0DMW5 78 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 TRIM67Q6ZTA4 783 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 OTOP3Q7RTS5 596 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 PPTC7Q8NI37 304 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 PHF7Q9BWX1 381 aaPredicted RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 EMILIN2Q9BXX0 1053 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 CPVLQ9H3G5 476 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 NRCAMQ92823 1304 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 CACNA1FO60840 1977 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 CHD8Q9HCK8 2581 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 PLA2G6O60733 806 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 CAND2O75155 1236 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 LGALS2P05162 132 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 KLRC2P26717 231 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 NHLH1Q02575 133 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 LIN9Q5TKA1 542 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 METTL7BQ6UX53 244 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 DNAJC14Q6Y2X3 702 aaPredicted RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 TRIM44Q96DX7 344 aaPredicted RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 ZSCAN10Q96SZ4 725 aaPredicted RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 PSTPIP2Q9H939 334 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 NGRNQ9NPE2 291 aaKnown RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 ADAMTS5Q9UNA0 930 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 CEP131Q9UPN4 1083 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 STAM2O75886 525 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 FGAP02671 866 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 HOXB8P17481 243 aaPredicted RBP8.6□□□□□ -1.03
GNE-205ENST00000539815 SDHBP21912 280 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 ELF1P32519 619 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 TMEM63BQ5T3F8 832 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.6□□□□□ -1.03
GNE-205ENST00000539815 DGLUCYQ7Z3D6 616 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 RNPEPQ9H4A4 650 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 COL4A1P02462 1669 aa8.6□□□□□ -1.03
GNE-205ENST00000539815 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 LCHNA4D1U4 455 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 H3BNC9 293 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 ZBTB5O15062 677 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 ZBTB24O43167 697 aaPredicted RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 ORC4O43929 436 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 CALM1P0DP23 149 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 CALM2P0DP24 149 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 CALM3P0DP25 149 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 PDHBP11177 359 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 RDXP35241 583 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 IRS1P35568 1242 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 ZMYM1Q5SVZ6 1142 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 TAPT1Q6NXT6 567 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 ZNF771Q7L3S4 317 aaPredicted RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 BORCS6Q96GS4 357 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 SGSM3Q96HU1 749 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 PDCD2LQ9BRP1 358 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 GZF1Q9H116 711 aaPredicted RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 C6orf50Q9HD87 102 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 DACT1Q9NYF0 836 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 TRPV2Q9Y5S1 764 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 CDY2AQ9Y6F7 541 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 M0R2C6 588 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 PER2O15055 1255 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 OFD1O75665 1012 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 STAT5BP51692 787 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 ADGRF4Q8IZF3 695 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 SHDQ96IW2 340 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 LZTS2Q9BRK4 669 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 RANBP17Q9H2T7 1088 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 SIGLEC14Q08ET2 396 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 GNL2Q13823 731 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 SPECC1Q5M775 1068 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 RARS2Q5T160 578 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 PDE12Q6L8Q7 609 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 MIS18BP1Q6P0N0 1132 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 RPS6KC1Q96S38 1066 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 MRPL9Q9BYD2 267 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 MAP3K20Q9NYL2 800 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 SPG21Q9NZD8 308 aa8.59□□□□□ -1.03
GNE-205ENST00000539815 DDX41Q9UJV9 622 aaKnown RBP8.59□□□□□ -1.03
GNE-205ENST00000539815 TREHO43280 583 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 DKC1O60832 514 aaKnown RBP eCLIP8.58□□□□□ -1.04
GNE-205ENST00000539815 CXCL14O95715 111 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 URODP06132 367 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 RLBP1P12271 317 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 ZNF200P98182 395 aaPredicted RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 MTMR1Q13613 665 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CELF3Q5SZQ8 465 aaKnown RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 IL31Q6EBC2 164 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CATSPER4Q7RTX7 472 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 NPAS4Q8IUM7 802 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 SAMD3Q8N6K7 520 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 SNX27Q96L92 541 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CDCA3Q99618 268 aaPredicted RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 ADAM2Q99965 735 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 JPH2Q9BR39 696 aaPredicted RBP8.58□□□□□ -1.04
GNE-205ENST00000539815 C1orf112Q9NSG2 853 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 CACNA1AO00555 2505 aa8.58□□□□□ -1.04
GNE-205ENST00000539815 ADGRA3Q8IWK6 1321 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms