RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RAB33AQ14088 237 aa8.29□□□□□ -1.08
CCDC7-209ENST00000539197 SPATC1Q76KD6 591 aa8.29□□□□□ -1.08
CCDC7-209ENST00000539197 DPH6Q7L8W6 267 aa8.29□□□□□ -1.08
CCDC7-209ENST00000539197 LMF1Q96S06 567 aa8.29□□□□□ -1.08
CCDC7-209ENST00000539197 TCTN3Q6NUS6 607 aa8.28□□□□□ -1.08
CCDC7-209ENST00000539197 SLC43A3Q8NBI5 491 aa8.28□□□□□ -1.08
CCDC7-209ENST00000539197 ST13P5Q8NFI4 369 aaPredicted RBP8.28□□□□□ -1.08
CCDC7-209ENST00000539197 KATNBL1Q9H079 304 aa8.28□□□□□ -1.08
CCDC7-209ENST00000539197 FAM90A27PA6NNH2 459 aa8.27□□□□□ -1.09
CCDC7-209ENST00000539197 LRRC47Q8N1G4 583 aaKnown RBP8.27□□□□□ -1.09
CCDC7-209ENST00000539197 GIMAP8Q8ND71 665 aaPredicted RBP8.27□□□□□ -1.09
CCDC7-209ENST00000539197 ALG1Q9BT22 464 aa8.27□□□□□ -1.09
CCDC7-209ENST00000539197 MRIQ9BWK5 157 aa8.27□□□□□ -1.09
CCDC7-209ENST00000539197 USP10Q14694 798 aaKnown RBP8.26□□□□□ -1.09
CCDC7-209ENST00000539197 NOLC1Q14978 699 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCDC7-209ENST00000539197 ZNF568Q3ZCX4 644 aa8.26□□□□□ -1.09
CCDC7-209ENST00000539197 FOXB2Q5VYV0 432 aa8.26□□□□□ -1.09
CCDC7-209ENST00000539197 DBPQ10586 325 aaPredicted RBP8.25□□□□□ -1.09
CCDC7-209ENST00000539197 BTBD8Q5XKL5 378 aa8.25□□□□□ -1.09
CCDC7-209ENST00000539197 TAX1BP1Q86VP1 789 aa8.25□□□□□ -1.09
CCDC7-209ENST00000539197 SPATA9Q9BWV2 254 aa8.25□□□□□ -1.09
CCDC7-209ENST00000539197 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
CCDC7-209ENST00000539197 ESYT3A0FGR9 886 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 ADCY3O60266 1144 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 RRADP55042 308 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 ARHGAP36Q6ZRI8 547 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 NEIL1Q96FI4 390 aaPredicted RBP8.24□□□□□ -1.09
CCDC7-209ENST00000539197 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 ZFR2Q9UPR6 939 aaKnown RBP8.24□□□□□ -1.09
CCDC7-209ENST00000539197 PCDHA8Q9Y5H6 950 aa8.24□□□□□ -1.09
CCDC7-209ENST00000539197 KCNK3O14649 394 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 CUTAO60888 179 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 AMY2AP04746 511 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 PTPN1P18031 435 aaKnown RBP8.23□□□□□ -1.09
CCDC7-209ENST00000539197 AMY2BP19961 511 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 POLD1P28340 1107 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 PRKD1Q15139 912 aaPredicted RBP8.23□□□□□ -1.09
CCDC7-209ENST00000539197 RNF151Q2KHN1 245 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 FAM209AQ5JX71 171 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 DPP8Q6V1X1 898 aaPredicted RBP8.23□□□□□ -1.09
CCDC7-209ENST00000539197 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 PTRH1Q86Y79 214 aaKnown RBP8.23□□□□□ -1.09
CCDC7-209ENST00000539197 NLGN4XQ8N0W4 816 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 RIC8BQ9NVN3 520 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 CBLCQ9ULV8 474 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 SRPK3Q9UPE1 567 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 HS3ST3A1Q9Y663 406 aa8.23□□□□□ -1.09
CCDC7-209ENST00000539197 MAN2B1O00754 1011 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 C6orf222P0C671 652 aaPredicted RBP8.22□□□□□ -1.09
CCDC7-209ENST00000539197 PYGMP11217 842 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 RAC3P60763 192 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 PAK1Q13153 545 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 MTDHQ86UE4 582 aaKnown RBP8.22□□□□□ -1.09
CCDC7-209ENST00000539197 PCDH19Q8TAB3 1148 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 TRIM55Q9BYV6 548 aa8.22□□□□□ -1.09
CCDC7-209ENST00000539197 CCDC85CA6NKD9 419 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 SRGAP2CP0DJJ0 459 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 PDE6AP16499 860 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 KRT15P19012 456 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 TOP3AQ13472 1001 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-209ENST00000539197 FUKQ8N0W3 1084 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 ZNF669Q96BR6 464 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-209ENST00000539197 ADOQ96SZ5 270 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 ZNF341Q9BYN7 854 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 CATSPERZQ9NTU4 200 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 ARHGAP28Q9P2N2 729 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 ING1Q9UK53 422 aaPredicted RBP8.21□□□□□ -1.1
CCDC7-209ENST00000539197 MSRB2Q9Y3D2 182 aa8.21□□□□□ -1.1
CCDC7-209ENST00000539197 DIAPH1O60610 1272 aaKnown RBP8.2□□□□□ -1.1
CCDC7-209ENST00000539197 MC4RP32245 332 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 JAM2P57087 298 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 KLF10Q13118 480 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 GPR19Q15760 415 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 TBR1Q16650 682 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 DPYSL5Q9BPU6 564 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 PCED1AQ9H1Q7 454 aa8.2□□□□□ -1.1
CCDC7-209ENST00000539197 AQP7O14520 342 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 COMTP21964 271 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 ADCY8P40145 1251 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 RBM25P49756 843 aaKnown RBP8.19□□□□□ -1.1
CCDC7-209ENST00000539197 IL13RA1P78552 427 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 ZMAT1Q5H9K5 638 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 IGFL4Q6B9Z1 124 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 KRTAP5-3Q6L8H2 238 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 PCDHA9Q9Y5H5 950 aa8.19□□□□□ -1.1
CCDC7-209ENST00000539197 TRBV23-1A0A0A0MS06 115 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 MATN2O00339 956 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 PLSCR1O15162 318 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 PDPK1O15530 556 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 SEC23AQ15436 765 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 WDR72Q3MJ13 1102 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 AGBL4Q5VU57 503 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 EP400NLQ6ZTU2 488 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 MAMDC2Q7Z304 686 aaPredicted RBP8.18□□□□□ -1.1
CCDC7-209ENST00000539197 SCUBE1Q8IWY4 988 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 EDAQ92838 391 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 PTPRN2Q92932 1015 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 FBXW5Q969U6 566 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 SCYL1Q96KG9 808 aa8.18□□□□□ -1.1
CCDC7-209ENST00000539197 EXOC2Q96KP1 924 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms