RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 KCNH5Q8NCM2 988 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 BTN2A2Q8WVV5 523 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 HNRNPLLQ8WVV9 542 aaKnown RBP6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 GMLQ99445 158 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 MTA3Q9BTC8 594 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 IRAK3Q9Y616 596 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 MAP3K19Q56UN5 1328 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 PEAK1Q9H792 1746 aa6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 TNS1Q9HBL0 1735 aaKnown RBP6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 BLMP54132 1417 aaPredicted RBP6.93□□□□□ -1.3
GCSHP4-201ENST00000538792 RGPD2P0DJD1 1756 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 LRRC37A3O60309 1634 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 A0A1W2PQJ5 194 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 ZC3H12DA2A288 527 aaKnown RBP6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 C7orf72A4D263 438 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 ITGAVP06756 1048 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 NAT2P11245 290 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 TMEM62Q0P6H9 643 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 RRS1Q15050 365 aaKnown RBP6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 FXNQ16595 210 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 POMZP3Q6PJE2 187 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 ZC3H14Q6PJT7 736 aaKnown RBP6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 TOM1L2Q6ZVM7 507 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 ZNF227Q86WZ6 799 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 NKX2-4Q9H2Z4 354 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 IRS2Q9Y4H2 1338 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 NSD3Q9BZ95 1437 aa6.92□□□□□ -1.3
GCSHP4-201ENST00000538792 ABCC6O95255 1503 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 F8W031 263 aaPredicted RBP6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 ARNTLO00327 626 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 GJB6O95452 261 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 HOXC9P31274 260 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 PRR5P85299 388 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 INF2Q27J81 1249 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 SV2CQ496J9 727 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 ZNF385BQ569K4 471 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 CRACR2BQ8N4Y2 399 aaPredicted RBP6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 LZTR1Q8N653 840 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 MARCH10Q8NA82 808 aaPredicted RBP6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 NPLOC4Q8TAT6 608 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 FRS2Q8WU20 508 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 IP6K1Q92551 441 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 DPF3Q92784 378 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 CYP26B1Q9NR63 512 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 THRAP3Q9Y2W1 955 aaKnown RBP6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 SBF2Q86WG5 1849 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 KIF20BQ96Q89 1820 aa6.91□□□□□ -1.3
GCSHP4-201ENST00000538792 FAM208AQ9UK61 1670 aaKnown RBP6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 E9PSI1 815 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 BUB1BO60566 1050 aaPredicted RBP6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 SF1Q15637 639 aaKnown RBP6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 ANKS3Q6ZW76 656 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 DACT3Q96B18 629 aaPredicted RBP6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 COG3Q96JB2 828 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 MMP19Q99542 508 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 POLR3GLQ9BT43 218 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 BCAS3Q9H6U6 928 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 TMEFF2Q9UIK5 374 aaPredicted RBP6.9□□□□□ -1.3
GCSHP4-201ENST00000538792 TRBV23OR9-2A0A075B6M9 112 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 KLF4O43474 513 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 EZH2Q15910 746 aaKnown RBP6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 HSP90AB2PQ58FF8 381 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 FAM129CQ86XR2 697 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 CCDC103Q8IW40 242 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 LTV1Q96GA3 475 aaPredicted RBP6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 CAMKK2Q96RR4 588 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 PANK3Q9H999 370 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 KIF7Q2M1P5 1343 aa6.89□□□□□ -1.31
GCSHP4-201ENST00000538792 MAP2P11137 1827 aaKnown RBP6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 RGPD1P0DJD0 1748 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 RFXAPO00287 272 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 CAPNS1P04632 268 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 LIMS1P48059 325 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 DDB1Q16531 1140 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 PRSS53Q2L4Q9 553 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 SLC10A6Q3KNW5 377 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 NBPF6Q5VWK0 638 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 KREMEN2Q8NCW0 462 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 PLEKHO2Q8TD55 490 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 NBPF4Q96M43 638 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
GCSHP4-201ENST00000538792 SHANK3Q9BYB0 1731 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 MEGF6O75095 1541 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 TNS2Q63HR2 1409 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 CCDC7Q96M83 1385 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 KCNQ2O43526 872 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 NPHS1O60500 1241 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 FUCA1P04066 466 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 SNRPB2P08579 225 aaKnown RBP6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 ATF2P15336 505 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 ECI1P42126 302 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 GRIA2P42262 883 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 DDR2Q16832 855 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 VMACQ2NL98 169 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 TCERG1LQ5VWI1 586 aa6.87□□□□□ -1.31
GCSHP4-201ENST00000538792 DENND5AQ6IQ26 1287 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms