RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 CD52P31358 61 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 CAMK1Q14012 370 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 SART3Q15020 963 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 PAN2Q504Q3 1202 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 TSHZ1Q6ZSZ6 1077 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 CATIPQ7Z7H3 387 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 GIMAP8Q8ND71 665 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 LINC01599Q8WXQ3 324 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 GLG1Q92896 1179 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 MYL10Q9BUA6 226 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 PLVAPQ9BX97 442 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 AGO3Q9H9G7 860 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 ERAP1Q9NZ08 941 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 PLXNA4Q9HCM2 1894 aa16.12■□□□□ 0.17
SMARCA4-206ENST00000538456 ITGB1P05556 798 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 KCNA2P16389 499 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 IBSPP21815 317 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 MRPS6P82932 125 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 ADAM15Q13444 863 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 MARCH8Q5T0T0 291 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 ADGRD2Q7Z7M1 963 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 RRP36Q96EU6 259 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 U3KPZ7 1027 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 ZDBF2Q9HCK1 2354 aa16.11■□□□□ 0.17
SMARCA4-206ENST00000538456 GSTTP1A0A1W2PQM5 241 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 MBLAC1A4D2B0 266 aaPredicted RBP16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 MEIS2O14770 477 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 PTH1RQ03431 593 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 TMEM62Q0P6H9 643 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 RBM23Q86U06 439 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 KLHL23Q8NBE8 558 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 SEPT1Q8WYJ6 367 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 EDAQ92838 391 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 MSLNLQ96KJ4 702 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 PHOX2BQ99453 314 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 SEC63Q9UGP8 760 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 USP34Q70CQ2 3546 aa16.1■□□□□ 0.17
SMARCA4-206ENST00000538456 E7EWF7 191 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 PIK3CDO00329 1044 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 ITGB5P18084 799 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 NRIP1P48552 1158 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 GATMP50440 423 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 MTMR1Q13613 665 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 NPAS4Q8IUM7 802 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 CMTR2Q8IYT2 770 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 CTCFLQ8NI51 663 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 P2RX5Q93086 422 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 CDHR1Q96JP9 859 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 SPZ1Q9BXG8 430 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 SMARCAD1Q9H4L7 1026 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 CLEC1BQ9P126 229 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 BARX2Q9UMQ3 279 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
SMARCA4-206ENST00000538456 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 M0QZ92 97 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 M0R296 226 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 EYA4O95677 639 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 ANTXR2P58335 489 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 UBE2SQ16763 222 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 RTN4RL1Q86UN2 441 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 EFHBQ8N7U6 833 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 SMRP1Q8NCR6 262 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 PRSS33Q8NF86 280 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 POF1BQ8WVV4 589 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 PBXIP1Q96AQ6 731 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 TRPC6Q9Y210 931 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 KMT2EQ8IZD2 1858 aa16.08■□□□□ 0.16
SMARCA4-206ENST00000538456 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 PLEKHA8P1O95397 391 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 GLP2RO95838 553 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 SCG2P13521 617 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 INSRRP14616 1297 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 GSPT1P15170 499 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 KIF5BP33176 963 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 PAK2Q13177 524 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 AAMPQ13685 434 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 IER5LQ5T953 404 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 IER5Q5VY09 327 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 TRIM67Q6ZTA4 783 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 ZNF654Q8IZM8 581 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 CMTR1Q8N1G2 835 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 CRIPAKQ8N1N5 446 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 TRAPPC12Q8WVT3 735 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 PSTPIP2Q9H939 334 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 PADI3Q9ULW8 664 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 TRPV2Q9Y5S1 764 aa16.07■□□□□ 0.16
SMARCA4-206ENST00000538456 FNDC1Q4ZHG4 1894 aaPredicted RBP16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 hCG_1642624A0A1W2PR95 340 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 RRN3P2A6NIE6 340 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 DDAH1O94760 285 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 STAG3L1P0CL83 205 aa16.06■□□□□ 0.16
SMARCA4-206ENST00000538456 COASYQ13057 564 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms