RNA–Protein interactions for RNA: ENST00000536301.1

CHD4-205, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 107 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-205ENST00000536301 WEE2P0C1S8 567 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 HSPD1P10809 573 aaKnown RBP6.09□□□□□ -1.43
CHD4-205ENST00000536301 ATF7P17544 494 aaPredicted RBP6.09□□□□□ -1.43
CHD4-205ENST00000536301 TECP42680 631 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 HSD17B4P51659 736 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 MRPS9P82933 396 aaKnown RBP6.09□□□□□ -1.43
CHD4-205ENST00000536301 SP4Q02446 784 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 C20orf194Q5TEA3 1177 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 PLPP4Q5VZY2 271 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 ANKRD54Q6NXT1 300 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 KANK3Q6NY19 840 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 LLGL2Q6P1M3 1020 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 CYFIP1Q7L576 1253 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 ZBTB33Q86T24 672 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 ZNF589Q86UQ0 364 aaPredicted RBP6.09□□□□□ -1.43
CHD4-205ENST00000536301 VSIG10LQ86VR7 867 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 CMTR2Q8IYT2 770 aaKnown RBP6.09□□□□□ -1.43
CHD4-205ENST00000536301 STAG2Q8N3U4 1231 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 DNAJB3Q8WWF6 145 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 FAM227BQ96M60 508 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 GPR20Q99678 358 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 IRF2BPLQ9H1B7 796 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 TMX1Q9H3N1 280 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 POMKQ9H5K3 350 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 MLXIPQ9HAP2 919 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 TSHZ2Q9NRE2 1034 aa6.09□□□□□ -1.43
CHD4-205ENST00000536301 DENND4AQ7Z401 1863 aa6.09□□□□□ -1.44
CHD4-205ENST00000536301 C2orf16Q68DN1 1984 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 HIDE1A8MVS5 230 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 FSCN2O14926 492 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 NPR3P17342 541 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MARK3P27448 753 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 GHRHRQ02643 423 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 TMEM62Q0P6H9 643 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 ALX1Q15699 326 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 TMEM266Q2M3C6 531 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MARCH8Q5T0T0 291 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 GPATCH4Q5T3I0 446 aaKnown RBP6.08□□□□□ -1.44
CHD4-205ENST00000536301 ASTLQ6HA08 431 aaPredicted RBP6.08□□□□□ -1.44
CHD4-205ENST00000536301 STOX1Q6ZVD7 989 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 DGLUCYQ7Z3D6 616 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 FCHSD1Q86WN1 690 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 KIAA2013Q8IYS2 634 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MIER1Q8N108 512 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 DCLK2Q8N568 766 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 PNMA1Q8ND90 353 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 FLCNQ8NFG4 579 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MICAL1Q8TDZ2 1067 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 PPP2R3CQ969Q6 453 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 NEK1Q96PY6 1258 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 PNMA2Q9UL42 364 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 DDX19BQ9UMR2 479 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 MRPL11Q9Y3B7 192 aaKnown RBP6.08□□□□□ -1.44
CHD4-205ENST00000536301 LAMA4Q16363 1823 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 DOCK8Q8NF50 2099 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 USP24Q9UPU5 2620 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 DOCK6Q96HP0 2047 aa6.08□□□□□ -1.44
CHD4-205ENST00000536301 CHD6Q8TD26 2715 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 CNOT1A5YKK6 2376 aaKnown RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 NOP56O00567 594 aaKnown RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 DHX16O60231 1041 aaKnown RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 FGF18O76093 207 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 PBX3P40426 434 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 NUBP1P53384 320 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 IGBP1P78318 339 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 NAALADL2Q58DX5 795 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 FAM102BQ5T8I3 360 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 TSHZ1Q6ZSZ6 1077 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 NPAS4Q8IUM7 802 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 C12orf76Q8N812 135 aaPredicted RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 TRAPPC12Q8WVT3 735 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 TTC14Q96N46 770 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 FAM49AQ9H0Q0 323 aaPredicted RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 DCTPP1Q9H773 170 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 LIMD1Q9UGP4 676 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 RALYQ9UKM9 306 aaKnown RBP6.07□□□□□ -1.44
CHD4-205ENST00000536301 SORCS3Q9UPU3 1222 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 R4GN57 208 aa6.07□□□□□ -1.44
CHD4-205ENST00000536301 SALL3Q9BXA9 1300 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 GSTTP1A0A1W2PQM5 241 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 TBKBP1A7MCY6 615 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 SPATA31C2B4DYI2 1134 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 ATP9AO75110 1047 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 TGFB3P10600 412 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 GNAT1P11488 350 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 SCG2P13521 617 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 CCND2P30279 289 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 MRPS6P82932 125 aaKnown RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 HNRNPUQ00839 825 aaKnown RBP eCLIP6.06□□□□□ -1.44
CHD4-205ENST00000536301 PPFIA1Q13136 1202 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 MTMR3Q13615 1198 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 ANGPT1Q15389 498 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 GRIK4Q16099 956 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 SPOUT1Q5T280 376 aaKnown RBP6.06□□□□□ -1.44
CHD4-205ENST00000536301 MCTP2Q6DN12 878 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 METTL7BQ6UX53 244 aa6.06□□□□□ -1.44
CHD4-205ENST00000536301 TMEM184AQ6ZMB5 413 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms