RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 TFRCP02786 760 aaKnown RBP17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 TMEM62Q0P6H9 643 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 TSGA10Q9BZW7 698 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 PTPROQ16827 1216 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 DSTYKQ6XUX3 929 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 RASAL2Q9UJF2 1139 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 PABPN1LA6NDY0 278 aaKnown RBP17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 TAL1P17542 331 aaPredicted RBP17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 ZNF445P59923 1031 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 SEPT1Q8WYJ6 367 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 RAD54LQ92698 747 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 NRXN3Q9Y4C0 1643 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 MCM3P25205 808 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 RGS2P41220 211 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 TROAPQ12815 778 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 PPP1R7Q15435 360 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 ICAM1P05362 532 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 SLURP2P0DP57 97 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 GCLCP48506 637 aaPredicted RBP17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 SCFD2Q8WU76 684 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 MTUS1Q9ULD2 1270 aa17.17■□□□□ 0.34
PPFIA1-222ENST00000532504 MAATS1Q7Z4T9 603 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 TMTC1Q8IUR5 882 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 AK9Q5TCS8 1911 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 COL14A1Q05707 1796 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 COPB1P53618 953 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 EPHA7Q15375 998 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 PHF20Q9BVI0 1012 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 VGLL4Q14135 290 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 NEK9Q8TD19 979 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 PPP1R9AQ9ULJ8 1098 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 SLIT2O94813 1529 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 ZNF233A6NK53 670 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 AFPP02771 609 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 RESP18Q5W5W9 173 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 RSRC2Q7L4I2 434 aaKnown RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 IDI2Q9BXS1 227 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
PPFIA1-222ENST00000532504 MYL1P05976 194 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 HERVK_113P62684 666 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 TNFAIP2Q03169 654 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 MYO1EQ12965 1108 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 STIM2Q9P246 746 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 MXI1P50539 228 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 PTK2Q05397 1052 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 SLFN12LQ6IEE8 588 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 FAM149B1Q96BN6 582 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 FAM198AQ9UFP1 575 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 FSD2A1L4K1 749 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 RASGRP2Q7LDG7 609 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 OR8K1Q8NGG5 319 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 NUCKS1Q9H1E3 243 aaKnown RBP17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 PDS5AQ29RF7 1337 aaKnown RBP17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 MANSC4A6NHS7 340 aaPredicted RBP17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 MFAP3P55082 362 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 CHADLQ6NUI6 762 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 NBPF11Q86T75 865 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
PPFIA1-222ENST00000532504 BFSP1Q12934 665 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 CEP57Q86XR8 500 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 IFIH1Q9BYX4 1025 aaKnown RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 MRC1P22897 1456 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 ATRNO75882 1429 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 ABCD1P33897 745 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 PSMD2Q13200 908 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 C11orf57Q6ZUT1 292 aaPredicted RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 CCDC25Q86WR0 208 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 SSX2IPQ9Y2D8 614 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 CCNE1P24864 410 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 ZBTB9Q96C00 473 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 FAM213AQ9BRX8 229 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 SMARCAD1Q9H4L7 1026 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 THAP12O43422 761 aa17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 SECISBP2LQ93073 1101 aaKnown RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 P2RX7Q99572 595 aaKnown RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 TOPORSQ9NS56 1045 aaPredicted RBP17.14■□□□□ 0.33
PPFIA1-222ENST00000532504 RGPD8O14715 1765 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 FKBP1AP62942 108 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 MRPS9P82933 396 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 CXCL11O14625 94 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 ELF1P32519 619 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 UNC13DQ70J99 1090 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 UBL4BQ8N7F7 174 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 CHD2O14647 1828 aaKnown RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 MXRA8Q9BRK3 442 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 KCNH7Q9NS40 1196 aa17.13■□□□□ 0.33
PPFIA1-222ENST00000532504 SAMSN1Q9NSI8 373 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms