RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 SCG2P13521 617 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 PFKFB3Q16875 520 aaPredicted RBP10.72□□□□□ -0.69
VPS26B-207ENST00000532160 L1TD1Q5T7N2 865 aaKnown RBP10.72□□□□□ -0.69
VPS26B-207ENST00000532160 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.72□□□□□ -0.69
VPS26B-207ENST00000532160 FCHSD1Q86WN1 690 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 TRIM22Q8IYM9 498 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 HLA-CQ95604 372 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 RAD9AQ99638 391 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 C16orf70Q9BSU1 422 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 SUGCTQ9HAC7 445 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 VPS54Q9P1Q0 977 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 COG5Q9UP83 839 aa10.72□□□□□ -0.69
VPS26B-207ENST00000532160 HAX1O00165 279 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 STXBP3O00186 592 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 ADAMTS3O15072 1205 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 LGR5O75473 907 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 DEXIO95424 95 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 CCND2P30279 289 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 THPOP40225 353 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 NAPAP54920 295 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 ERVK-21P61565 698 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 GUCY1B3Q02153 619 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 CUL4AQ13619 759 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 IKBKEQ14164 716 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 SERINC5Q86VE9 423 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 SMARCC2Q8TAQ2 1214 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 TGS1Q96RS0 853 aaKnown RBP10.71□□□□□ -0.69
VPS26B-207ENST00000532160 OSBPL7Q9BZF2 842 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 KCNJ14Q9UNX9 436 aa10.71□□□□□ -0.69
VPS26B-207ENST00000532160 KAT6AQ92794 2004 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 STK36Q9NRP7 1315 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 GCOM1H8Y6P7 765 aaPredicted RBP10.7□□□□□ -0.7
VPS26B-207ENST00000532160 EFCAB14O75071 495 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 LGALS2P05162 132 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 POLR2MP0CAP2 368 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 SMIM10L2AP0DMW4 78 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 SMIM10L2BP0DMW5 78 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 GJB2P29033 226 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 HOXC8P31273 242 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 MRPS9P82933 396 aaKnown RBP10.7□□□□□ -0.7
VPS26B-207ENST00000532160 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 UBE2SQ16763 222 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 KCNV1Q6PIU1 500 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 SAMD3Q8N6K7 520 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 DBF4BQ8NFT6 615 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 KHSRPQ92945 711 aaKnown RBP eCLIP10.7□□□□□ -0.7
VPS26B-207ENST00000532160 ATP6V0A1Q93050 837 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 LLPHQ9BRT6 129 aaKnown RBP10.7□□□□□ -0.7
VPS26B-207ENST00000532160 C17orf80Q9BSJ5 609 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 EPHX3Q9H6B9 360 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 MLXIPQ9HAP2 919 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 BARHL2Q9NY43 387 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 MAP3K20Q9NYL2 800 aaKnown RBP10.7□□□□□ -0.7
VPS26B-207ENST00000532160 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 TELO2Q9Y4R8 837 aa10.7□□□□□ -0.7
VPS26B-207ENST00000532160 FRMPD4Q14CM0 1322 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 EMSYQ7Z589 1322 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 C17orf102A2RUQ5 167 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 SMCO2A6NFE2 343 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 RSPH10B2B2RC85 870 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 H3BRB1 525 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 TREHO43280 583 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 CTSHP09668 335 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 RSPH10BP0C881 870 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 TGFB3P10600 412 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 SKOR2Q2VWA4 1001 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-207ENST00000532160 PLEKHG4Q58EX7 1191 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 USP17L6PQ6QN14 398 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 FAM184AQ8NB25 1140 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 PGBD1Q96JS3 809 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 RNPEPQ9H4A4 650 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 TUT1Q9H6E5 874 aaKnown RBP10.69□□□□□ -0.7
VPS26B-207ENST00000532160 LMCD1Q9NZU5 365 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.69□□□□□ -0.7
VPS26B-207ENST00000532160 NLRC5Q86WI3 1866 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
VPS26B-207ENST00000532160 ATG2AQ2TAZ0 1938 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 HSP90AA1P07900 732 aaKnown RBP10.68□□□□□ -0.7
VPS26B-207ENST00000532160 NLRP5P59047 1200 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 HMGN5P82970 282 aaKnown RBP10.68□□□□□ -0.7
VPS26B-207ENST00000532160 HTRA4P83105 476 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-207ENST00000532160 CYFIP1Q7L576 1253 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 FBXO22Q8NEZ5 403 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 RASGRP4Q8TDF6 673 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 INPP4AQ96PE3 977 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-207ENST00000532160 GPR20Q99678 358 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 C1QTNF1Q9BXJ1 281 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 UBE2ZQ9H832 354 aaPredicted RBP10.68□□□□□ -0.7
VPS26B-207ENST00000532160 CD320Q9NPF0 282 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 SETD4Q9NVD3 440 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 TMEM260Q9NX78 707 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 RTEL1Q9NZ71 1219 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 INSL6Q9Y581 213 aa10.68□□□□□ -0.7
VPS26B-207ENST00000532160 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.67□□□□□ -0.7
VPS26B-207ENST00000532160 SPATA31C2B4DYI2 1134 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms