RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 ATP2A2P16615 1042 aaKnown RBP16.73■□□□□ 0.27
USP35-203ENST00000529308 HSPA1LP34931 641 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 SLCO1A2P46721 670 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 PTPAQ15257 358 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 WRNIP1Q96S55 665 aa16.73■□□□□ 0.27
USP35-203ENST00000529308 NDUFB10O96000 172 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 NR3C1P04150 777 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 PDHBP11177 359 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 CCDC97Q96F63 343 aaPredicted RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 ACCSQ96QU6 501 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 ARHGEF28Q8N1W1 1705 aaKnown RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 RNF40O75150 1001 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 KCTD2Q14681 263 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 VPS72Q15906 364 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 DALRD3Q5D0E6 543 aaKnown RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 NFRKBQ6P4R8 1299 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 TSNARE1Q96NA8 513 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 SLC16A4O15374 487 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 PALMO75781 387 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 SERPING1P05155 500 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 FGFR2P21802 821 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 MTMR1Q13613 665 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 NFU1Q9UMS0 254 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 BZW2Q9Y6E2 419 aaKnown RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 IPO5O00410 1097 aaKnown RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
USP35-203ENST00000529308 CCDC89Q8N998 374 aa16.72■□□□□ 0.27
USP35-203ENST00000529308 SPATA31D1Q6ZQQ2 1576 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 CCT5P48643 541 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 SLC8A3P57103 927 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 DPYDQ12882 1025 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 TTC31Q49AM3 519 aaPredicted RBP16.71■□□□□ 0.27
USP35-203ENST00000529308 SBK1Q52WX2 424 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 DPY19L2Q6NUT2 758 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 PADI6Q6TGC4 694 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 RAD9BQ6WBX8 426 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.71■□□□□ 0.27
USP35-203ENST00000529308 DNAJC12Q9UKB3 198 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 DEPDC5O75140 1603 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 DNAJC5Q9H3Z4 198 aa16.71■□□□□ 0.27
USP35-203ENST00000529308 ADD3Q9UEY8 706 aaKnown RBP16.71■□□□□ 0.27
USP35-203ENST00000529308 PVALEFA0A1B0GWK0 134 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 MYMKA6NI61 221 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 LMNB1P20700 586 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 EARS2Q5JPH6 523 aaKnown RBP16.71■□□□□ 0.26
USP35-203ENST00000529308 SCARA5Q6ZMJ2 495 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 NLRP4Q96MN2 994 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 SPZ1Q9BXG8 430 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 CAPS2Q9BXY5 557 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 NRBP2Q9NSY0 501 aa16.71■□□□□ 0.26
USP35-203ENST00000529308 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 N4BP1O75113 896 aaKnown RBP16.7■□□□□ 0.26
USP35-203ENST00000529308 MFAP3P55082 362 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 IFRD2Q12894 506 aaPredicted RBP16.7■□□□□ 0.26
USP35-203ENST00000529308 NTRK3Q16288 839 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 THNSL1Q8IYQ7 743 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 TC2NQ8N9U0 490 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 MROH1Q8NDA8 1641 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 KLK7P49862 253 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 AP3B2Q13367 1082 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 CYP4F22Q6NT55 531 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 PTF1AQ7RTS3 328 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 RTKN2Q8IZC4 609 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 DCAF4Q8WV16 495 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 DAAM1Q9Y4D1 1078 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 K7ERI5 159 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 STXBP3O00186 592 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
USP35-203ENST00000529308 DYNLT1P63172 113 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
USP35-203ENST00000529308 GUF1Q8N442 669 aaKnown RBP16.7■□□□□ 0.26
USP35-203ENST00000529308 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
USP35-203ENST00000529308 MAPK4P31152 587 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 LIG3P49916 1009 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 RC3H1Q5TC82 1133 aaKnown RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 SAAL1Q96ER3 474 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 CCSER1Q9C0I3 900 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 THAP12O43422 761 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 CNGA1P29973 690 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 B4GALNT4Q76KP1 1039 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 PIM2Q9P1W9 311 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 DHX9Q08211 1270 aaKnown RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 ZNF211Q13398 564 aaPredicted RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 C7orf31Q8N865 590 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 AKT3Q9Y243 479 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 ZNF185O15231 689 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 FGGP02679 453 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 ATP1A1P05023 1023 aaKnown RBP16.69■□□□□ 0.26
USP35-203ENST00000529308 SETDB1Q15047 1291 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 CYFIP1Q7L576 1253 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 DPP9Q86TI2 863 aa16.69■□□□□ 0.26
USP35-203ENST00000529308 VSIG1Q86XK7 387 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms