RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 BARX1Q9HBU1 254 aaPredicted RBP4.39□□□□□ -1.71
COPB1-205ENST00000526527 CCDC85CA6NKD9 419 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 GJB6O95452 261 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 PTH1RQ03431 593 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 EXTL1Q92935 676 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 C1orf159Q96HA4 380 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 ADOQ96SZ5 270 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 CDIP1Q9H305 208 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 SMOC1Q9H4F8 434 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 ST7Q9NRC1 585 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 HSPBP1Q9NZL4 362 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 ASH2LQ9UBL3 628 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 ADAM29Q9UKF5 820 aa4.38□□□□□ -1.71
COPB1-205ENST00000526527 FOXS1O43638 330 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 KLHL18O94889 574 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 CNOT4O95628 575 aaKnown RBP4.37□□□□□ -1.71
COPB1-205ENST00000526527 DGCR2P98153 550 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 BMS1Q14692 1282 aaKnown RBP4.37□□□□□ -1.71
COPB1-205ENST00000526527 ZC3H12BQ5HYM0 836 aaKnown RBP4.37□□□□□ -1.71
COPB1-205ENST00000526527 SLC35F1Q5T1Q4 408 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 DPH6Q7L8W6 267 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 PHOSPHO1Q8TCT1 267 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 NEU4Q8WWR8 484 aaPredicted RBP4.37□□□□□ -1.71
COPB1-205ENST00000526527 SGSM3Q96HU1 749 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 JAM3Q9BX67 310 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 NPFFR2Q9Y5X5 522 aa4.37□□□□□ -1.71
COPB1-205ENST00000526527 SLC27A2O14975 620 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 GRIA2P42262 883 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 GRIN1Q05586 938 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 SSRP1Q08945 709 aaKnown RBP4.36□□□□□ -1.71
COPB1-205ENST00000526527 SERINC3Q13530 473 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 CSRP2Q16527 193 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 MRM1Q6IN84 353 aaKnown RBP4.36□□□□□ -1.71
COPB1-205ENST00000526527 TCTN3Q6NUS6 607 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 Q6ZUG5 572 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 NOP9Q86U38 636 aaKnown RBP4.36□□□□□ -1.71
COPB1-205ENST00000526527 CELF2-AS1Q8N7Q2 184 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 DTX3Q8N9I9 347 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 PIP4K2CQ8TBX8 421 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 MICAL1Q8TDZ2 1067 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 CLEC4DQ8WXI8 215 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 EDAQ92838 391 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 GNRHR2Q96P88 292 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 SEC61A2Q9H9S3 476 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 SNTG2Q9NY99 539 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 PPARGC1AQ9UBK2 798 aaKnown RBP4.36□□□□□ -1.71
COPB1-205ENST00000526527 TMA7Q9Y2S6 64 aaKnown RBP4.36□□□□□ -1.71
COPB1-205ENST00000526527 MSRB2Q9Y3D2 182 aa4.36□□□□□ -1.71
COPB1-205ENST00000526527 MAFKO60675 156 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 MSCO60682 206 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 CLSTN1O94985 981 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 CAPNS1P04632 268 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 HSP90AA2PQ14568 343 aaPredicted RBP4.35□□□□□ -1.71
COPB1-205ENST00000526527 SMAD2Q15796 467 aaKnown RBP4.35□□□□□ -1.71
COPB1-205ENST00000526527 SLC10A6Q3KNW5 377 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 CCDC144BQ3MJ40 725 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 VASNQ6EMK4 673 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 CYP4F22Q6NT55 531 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 RALYLQ86SE5 291 aaKnown RBP4.35□□□□□ -1.71
COPB1-205ENST00000526527 LDLRAD3Q86YD5 345 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 RBM12BQ8IXT5 1001 aaKnown RBP4.35□□□□□ -1.71
COPB1-205ENST00000526527 TTLL11Q8NHH1 800 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 SLC6A20Q9NP91 592 aa4.35□□□□□ -1.71
COPB1-205ENST00000526527 TRAV20A0A0B4J274 112 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 KRIT1O00522 736 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 KNG1P01042 644 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 CKMP06732 381 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 CENPBP07199 599 aaPredicted RBP4.34□□□□□ -1.71
COPB1-205ENST00000526527 GLRBP48167 497 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 RASA3Q14644 834 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 LONRF2Q1L5Z9 754 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 AGBL4Q5VU57 503 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 GPR155Q7Z3F1 870 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 TRIM48Q8IWZ4 208 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 AJUBAQ96IF1 538 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 LRRC37BQ96QE4 947 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 LMF1Q96S06 567 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 CDC6Q99741 560 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 AARSD1Q9BTE6 412 aaKnown RBP4.34□□□□□ -1.71
COPB1-205ENST00000526527 ZFP69BQ9UJL9 534 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 SLC4A7Q9Y6M7 1214 aa4.34□□□□□ -1.71
COPB1-205ENST00000526527 CCDC163A0A0D9SF12 145 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 LTFP02788 710 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 CSF2RBP32927 897 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 IL12RB1P42701 662 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 SKIDA1Q1XH10 827 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 STPG3Q8N7X2 389 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 ZSWIM2Q8NEG5 633 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 THAP3Q8WTV1 239 aaPredicted RBP4.33□□□□□ -1.72
COPB1-205ENST00000526527 KCTD13Q8WZ19 329 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 PKNOX2Q96KN3 472 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 AGAP2Q99490 1192 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 GPR27Q9NS67 375 aa4.33□□□□□ -1.72
COPB1-205ENST00000526527 KDM2BQ8NHM5 1336 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 FBXO21O94952 628 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 CHGBP05060 677 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 COL6A2P12110 1019 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 FAHP16930 419 aa4.32□□□□□ -1.72
COPB1-205ENST00000526527 NAT1P18440 290 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms