RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
CTNNA1-237ENST00000523275 TUBE1Q9UJT0 475 aa13.44□□□□□ -0.26
CTNNA1-237ENST00000523275 NAP1L2Q9ULW6 460 aaPredicted RBP13.44□□□□□ -0.26
CTNNA1-237ENST00000523275 PTPRSQ13332 1948 aa13.44□□□□□ -0.26
CTNNA1-237ENST00000523275 BDP1A6H8Y1 2624 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 CCDC196A0A1B0GTZ2 297 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 MBLAC1A4D2B0 266 aaPredicted RBP13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 RRN3P2A6NIE6 340 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 STXBP3O00186 592 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 MEIS1O00470 390 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 ARP10275 920 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 INSRRP14616 1297 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 CDC27P30260 824 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 DNAJB3Q8WWF6 145 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 TNPO1Q92973 898 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 PGBD1Q96JS3 809 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 SAMD11Q96NU1 681 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 PCYT2Q99447 389 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 ANO3Q9BYT9 981 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 DOCK5Q9H7D0 1870 aa13.43□□□□□ -0.26
CTNNA1-237ENST00000523275 NFASCO94856 1347 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 RPLP2P05387 115 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 GHRP10912 638 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 ZNF76P36508 570 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 SREBF1P36956 1147 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 ACTR2P61160 394 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 IGBP1P78318 339 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 AP3B2Q13367 1082 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 LPIN1Q14693 890 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 KCNB2Q92953 911 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 NECAB3Q96P71 396 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 AGO4Q9HCK5 861 aaKnown RBP13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 TMEM260Q9NX78 707 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
CTNNA1-237ENST00000523275 CPA1P15085 419 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 CLK2P49760 499 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 METAP2P50579 478 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 STAT5BP51692 787 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 MRPS6P82932 125 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 MGAT3Q09327 533 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 APOBRQ0VD83 1088 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 ITGB3BPQ13352 177 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 PLCB4Q15147 1175 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 PFKFB3Q16875 520 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 EPC2Q52LR7 807 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 Q6ZUG5 572 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 NIPA1Q7RTP0 329 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 IL17RAQ96F46 866 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 JAKMIP1Q96N16 626 aaKnown RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 FAM49AQ9H0Q0 323 aaPredicted RBP13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
CTNNA1-237ENST00000523275 H3BNC9 293 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 ENPP3O14638 875 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 ATG7O95352 703 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 SCG2P13521 617 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 HSPA4P34932 840 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 SLC26A2P50443 739 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 PTPROQ16827 1216 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 FBXO47Q5MNV8 452 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 IER5Q5VY09 327 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 BLOC1S2Q6QNY1 142 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 BRF1Q92994 677 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 ZBTB10Q96DT7 871 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 MRPL38Q96DV4 380 aaKnown RBP13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 C6orf50Q9HD87 102 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 PCDHA2Q9Y5H9 948 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 SNX14Q9Y5W7 946 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 KAT6AQ92794 2004 aa13.4□□□□□ -0.26
CTNNA1-237ENST00000523275 MICAL3Q7RTP6 2002 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 PRPF3O43395 683 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 CCNE2O96020 404 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 CYP3A4P08684 503 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 GPM6BQ13491 265 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 TSHZ1Q6ZSZ6 1077 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 PLA2G4DQ86XP0 818 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 FBXL16Q8N461 479 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 CCDC12Q8WUD4 166 aaPredicted RBP13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 CCDC136Q96JN2 1154 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 AGO3Q9H9G7 860 aaKnown RBP13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
CTNNA1-237ENST00000523275 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 ESYT2A0FGR8 921 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 FAM86B1E9PN63 330 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 M0QZ92 97 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 DDX39AO00148 427 aaKnown RBP13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 BACH1O14867 736 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 FAM86B2P0C5J1 330 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 RPS6KB1P23443 525 aa13.38□□□□□ -0.27
CTNNA1-237ENST00000523275 PSMA5P28066 241 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms