RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 MLXIPQ9HAP2 919 aa16.2■□□□□ 0.18
NKX3-1-202ENST00000523261 TCP11L1Q9NUJ3 509 aa16.2■□□□□ 0.18
NKX3-1-202ENST00000523261 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 PDE12Q6L8Q7 609 aaKnown RBP16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 LLGL2Q6P1M3 1020 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 TSHZ1Q6ZSZ6 1077 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 TRIM50Q86XT4 487 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 CYP2W1Q8TAV3 490 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 PANK1Q8TE04 598 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 AGO3Q9H9G7 860 aaKnown RBP16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 R4GN57 208 aa16.19■□□□□ 0.18
NKX3-1-202ENST00000523261 GPR179Q6PRD1 2367 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 SMARCA5O60264 1052 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 FGF18O76093 207 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 ST3GAL2Q16842 350 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 RSPO4Q2I0M5 234 aaPredicted RBP16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 VSIG10LQ86VR7 867 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 NECTIN4Q96NY8 510 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 RTP3Q9BQQ7 232 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 LRRCC1Q9C099 1032 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 MRPL11Q9Y3B7 192 aaKnown RBP16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 PCDHB12Q9Y5F1 795 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 KAT6AQ92794 2004 aa16.18■□□□□ 0.18
NKX3-1-202ENST00000523261 OPLAHO14841 1288 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 CFBP00751 764 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 CD52P31358 61 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 HSD17B4P51659 736 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 ZMYM1Q5SVZ6 1142 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 TAF2Q6P1X5 1199 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 ZDHHC14Q8IZN3 488 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 RUBCNQ92622 972 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 LIMD1Q9UGP4 676 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 NRCAMQ92823 1304 aa16.17■□□□□ 0.18
NKX3-1-202ENST00000523261 NOP56O00567 594 aaKnown RBP16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 SCG2P13521 617 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 GHRHRQ02643 423 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 PGM5Q15124 567 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 PLPP4Q5VZY2 271 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 DCLK2Q8N568 766 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 ZFP91Q96JP5 570 aaPredicted RBP16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 TTC14Q96N46 770 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 HINFPQ9BQA5 517 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 FTHL17Q9BXU8 183 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 ADAM7Q9H2U9 754 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 TOMM22Q9NS69 142 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 TMEM260Q9NX78 707 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 CDY2AQ9Y6F7 541 aa16.16■□□□□ 0.18
NKX3-1-202ENST00000523261 MYH6P13533 1939 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 ITIH3Q06033 890 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 APOBRQ0VD83 1088 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 FNDC1Q4ZHG4 1894 aaPredicted RBP16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 CES5AQ6NT32 575 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 RSPH3Q86UC2 560 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 FANCMQ8IYD8 2048 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 ADGRF4Q8IZF3 695 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 TDRD5Q8NAT2 981 aaKnown RBP16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 GPR20Q99678 358 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 DOCK5Q9H7D0 1870 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 AAASQ9NRG9 546 aa16.15■□□□□ 0.18
NKX3-1-202ENST00000523261 HIDE1A8MVS5 230 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 SPOUT1Q5T280 376 aaKnown RBP16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 METTL7BQ6UX53 244 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 THNSL1Q8IYQ7 743 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 DNAJB3Q8WWF6 145 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 CASP10Q92851 521 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 ERVK-5Q9HDB9 667 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 HCSTQ9UBK5 93 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 LZTS1Q9Y250 596 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 TELO2Q9Y4R8 837 aa16.14■□□□□ 0.17
NKX3-1-202ENST00000523261 MTHFRP42898 656 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 MRPS6P82932 125 aaKnown RBP16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 UTP14CQ5TAP6 766 aaKnown RBP16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 COLGALT1Q8NBJ5 622 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 ZBTB40Q9NUA8 1239 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 LRFN2Q9ULH4 789 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 PADI3Q9ULW8 664 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 USTQ9Y2C2 406 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 SQORQ9Y6N5 450 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 PKD1L2Q7Z442 2459 aa16.13■□□□□ 0.17
NKX3-1-202ENST00000523261 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 WEE2P0C1S8 567 aa16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 CCND2P30279 289 aa16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 VPS53Q5VIR6 699 aa16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 SIX5Q8N196 739 aa16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 MRPS27Q92552 414 aaKnown RBP16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 TCF25Q9BQ70 676 aa16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 NGRNQ9NPE2 291 aaKnown RBP16.12■□□□□ 0.17
NKX3-1-202ENST00000523261 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms