RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 TRERF1Q96PN7 1200 aa16.87■□□□□ 0.29
SDHA-218ENST00000515752 MRPL44Q9H9J2 332 aaKnown RBP16.87■□□□□ 0.29
SDHA-218ENST00000515752 SIK3Q9Y2K2 1263 aa16.87■□□□□ 0.29
SDHA-218ENST00000515752 UBE4BO95155 1302 aa16.87■□□□□ 0.29
SDHA-218ENST00000515752 MYPNQ86TC9 1320 aa16.87■□□□□ 0.29
SDHA-218ENST00000515752 ATP2A1O14983 1001 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 P4HBP07237 508 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 RPS6P62753 249 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 COG2Q14746 738 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 TKFCQ3LXA3 575 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 FRMD5Q7Z6J6 570 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 NELFCDQ8IXH7 590 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 ANKRD7Q92527 254 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 RUSC1Q9BVN2 902 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 ZSWIM4Q9H7M6 989 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 PARVGQ9HBI0 331 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 TYW1Q9NV66 732 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 TMOD4Q9NZQ9 345 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 COL20A1Q9P218 1284 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 PLAGL2Q9UPG8 496 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.86■□□□□ 0.29
SDHA-218ENST00000515752 ZHX2Q9Y6X8 837 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 MAFGO15525 162 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 GUCY2CP25092 1073 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 MTMR1Q13613 665 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 MIER3Q7Z3K6 550 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 TRIM59Q8IWR1 403 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 RBM46Q8TBY0 533 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 ZKSCAN4Q969J2 545 aaPredicted RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 METTL14Q9HCE5 456 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 AGO4Q9HCK5 861 aaKnown RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 GGA3Q9NZ52 723 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 TCEAL9Q9UHQ7 104 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 ZNF215Q9UL58 517 aaPredicted RBP16.86■□□□□ 0.29
SDHA-218ENST00000515752 ADAMTS5Q9UNA0 930 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 DOCK1Q14185 1865 aa16.86■□□□□ 0.29
SDHA-218ENST00000515752 RASSF10A6NK89 507 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 URI1O94763 535 aaPredicted RBP16.85■□□□□ 0.29
SDHA-218ENST00000515752 NR2F2P24468 414 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 DSG3P32926 999 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 ZNF131P52739 623 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 NFIL3Q16649 462 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 MUM1L1Q5H9M0 696 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 WDR59Q6PJI9 974 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 NEK11Q8NG66 645 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 TRPM4Q8TD43 1214 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 PIGOQ8TEQ8 1089 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 LXNQ9BS40 222 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 HAUS4Q9H6D7 363 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 MMRN2Q9H8L6 949 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 LZTFL1Q9NQ48 299 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 AGPAT5Q9NUQ2 364 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 HOXC10Q9NYD6 342 aa16.85■□□□□ 0.29
SDHA-218ENST00000515752 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 SLC16A3O15427 465 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 LYPLA2O95372 231 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 SFNP31947 248 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 PGM5Q15124 567 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 EHBP1Q8NDI1 1231 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 CHP1Q99653 195 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 FGFBP2Q9BYJ0 223 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 HOMER2Q9NSB8 354 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 DBR1Q9UK59 544 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 EIF3CLB5ME19 914 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 GCNT3O95395 438 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 KCNA4P22459 653 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 JAK3P52333 1124 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 NCBP1Q09161 790 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 MYCT1Q8N699 235 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 RDM1Q8NG50 284 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 GOLGA5Q8TBA6 731 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 SYN2Q92777 582 aaPredicted RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 TAAR1Q96RJ0 339 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 EIF3CQ99613 913 aaKnown RBP16.84■□□□□ 0.29
SDHA-218ENST00000515752 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 TIPINQ9BVW5 301 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 SPON1Q9HCB6 807 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 RNF146Q9NTX7 359 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 PCDHB13Q9Y5F0 798 aa16.84■□□□□ 0.29
SDHA-218ENST00000515752 SMCHD1A6NHR9 2005 aa16.83■□□□□ 0.29
SDHA-218ENST00000515752 DHX15O43143 795 aaKnown RBP16.83■□□□□ 0.28
SDHA-218ENST00000515752 EPS15P42566 896 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 HMGCS2P54868 508 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 MRPS9P82933 396 aaKnown RBP16.83■□□□□ 0.28
SDHA-218ENST00000515752 KRT76Q01546 638 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 ALCAMQ13740 583 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 CATSPERGQ6ZRH7 1159 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 CACNA2D4Q7Z3S7 1137 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.28
SDHA-218ENST00000515752 MNS1Q8NEH6 495 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms