RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 KRT13P13646 458 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 HOXC9P31274 260 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 VPS41P49754 854 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 CACNB1Q02641 598 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 SPAG1Q07617 926 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 MPP2Q14168 576 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PLS1Q14651 629 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 TRIP13Q15645 432 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 MEA1Q16626 185 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 KCTD21Q4G0X4 260 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 MIIPQ5JXC2 388 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 OR52E8Q6IFG1 317 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 RAVER1Q8IY67 606 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 FAM13CQ8NE31 585 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 FBXO25Q8TCJ0 367 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 SCG3Q8WXD2 468 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 GPKOWQ92917 476 aaPredicted RBP eCLIP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ISCUQ9H1K1 167 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ALG13Q9NP73 1137 aaKnown RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 COPRSQ9NQ92 184 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 FAM114A2Q9NRY5 505 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 NMRK1Q9NWW6 199 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 AMOTL2Q9Y2J4 779 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 JCADQ9P266 1359 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PCDH11XQ9BZA7 1347 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 GRID2IPA4D2P6 1211 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PEX11AO75192 247 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 SPAG7O75391 227 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 TPBGLP0DKB5 382 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 GHRP10912 638 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ABCB4P21439 1286 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 KCNJ1P48048 391 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 CPA2P48052 419 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ASIC1P78348 528 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 BTKQ06187 659 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 MTM1Q13496 603 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 TRIM14Q14142 442 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ACAP1Q15027 740 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PDIA6Q15084 440 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PDXDC2PQ6P474 469 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 CRACR2BQ8N4Y2 399 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 METTL13Q8N6R0 699 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ANKLE1Q8NAG6 615 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 PIGOQ8TEQ8 1089 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 NRG4Q8WWG1 115 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 GJA10Q969M2 543 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 AGBL1Q96MI9 1066 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 TTYH3Q9C0H2 523 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 KIAA1683Q9H0B3 1180 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 MYLK2Q9H1R3 596 aa7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 DENND2DQ9H6A0 471 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 USP15Q9Y4E8 981 aaPredicted RBP7.88□□□□□ -1.15
LIMCH1-207ENST00000508466 ARHGEF10O15013 1369 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 METP08581 1390 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 BOLA2-SMG1P6H3BVE0 249 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TLR2O60603 784 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 LUC7L3O95232 432 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 BAG2O95816 211 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 FGGP02679 453 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 PLCG2P16885 1265 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 CALB2P22676 271 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 ZNF131P52739 623 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TNNC1P63316 161 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 CFAP157Q5JU67 520 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 DSTYKQ6XUX3 929 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 CD302Q8IX05 232 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 LRRC45Q96CN5 670 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 MXD3Q9BW11 206 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TMX4Q9H1E5 349 aaPredicted RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 CPVLQ9H3G5 476 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 C12orf65Q9H3J6 166 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TUT1Q9H6E5 874 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 ARHGEF38Q9NXL2 777 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 SCOCQ9UIL1 159 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 NOC2LQ9Y3T9 749 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 WASF2Q9Y6W5 498 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TET3O43151 1660 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 MYH7BA7E2Y1 1941 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 GPR75-ASB3A0A0A6YYF3 556 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 C2orf71A6NGG8 1288 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 PSMA7O14818 248 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 RASA1P20936 1047 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 POLD1P28340 1107 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 GALK1P51570 392 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 RCN1Q15293 331 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 ZYXQ15942 572 aaKnown RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 Q4G0T1 1027 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 AMOTQ4VCS5 1084 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 MDH1BQ5I0G3 518 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 SPTY2D1Q68D10 685 aaPredicted RBP7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 ECHDC2Q86YB7 292 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 HOMEZQ8IX15 550 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 NELFCDQ8IXH7 590 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 SLC25A41Q8N5S1 370 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 RAB17Q9H0T7 212 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
LIMCH1-207ENST00000508466 SWAP70Q9UH65 585 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms