RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 TELO2Q9Y4R8 837 aa18■□□□□ 0.47
SSBP1-214ENST00000498107 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
SSBP1-214ENST00000498107 MYH9P35579 1960 aaKnown RBP18■□□□□ 0.47
SSBP1-214ENST00000498107 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-214ENST00000498107 PRPHP41219 470 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 PTGDRQ13258 359 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 CCDC60Q8IWA6 550 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-214ENST00000498107 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 PCYT2Q99447 389 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 TMEM60Q9H2L4 133 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 GABBR1Q9UBS5 961 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 GTF2IRD1Q9UHL9 959 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 NOD1Q9Y239 953 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 MAFBQ9Y5Q3 323 aaPredicted RBP17.99■□□□□ 0.47
SSBP1-214ENST00000498107 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
SSBP1-214ENST00000498107 NRCAMQ92823 1304 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 ALPK3Q96L96 1907 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 PDE4DIPQ5VU43 2346 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 C17orf102A2RUQ5 167 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 CLTBP09497 229 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 SMIM10L2AP0DMW4 78 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 SMIM10L2BP0DMW5 78 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 NBR1Q14596 966 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 EPHA7Q15375 998 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 NCAPH2Q6IBW4 605 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 CKAP2LQ8IYA6 745 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 C7orf61Q8IZ16 206 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 HDAC6Q9UBN7 1215 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 TRPC6Q9Y210 931 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 STK24Q9Y6E0 443 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 IGSF9BQ9UPX0 1349 aa17.98■□□□□ 0.47
SSBP1-214ENST00000498107 RRN3P2A6NIE6 340 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 HBP1O60381 514 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 CD4P01730 458 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 P4HBP07237 508 aaKnown RBP17.97■□□□□ 0.47
SSBP1-214ENST00000498107 MARK3P27448 753 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 PLCB4Q15147 1175 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 ARL6IP4Q66PJ3 421 aaKnown RBP17.97■□□□□ 0.47
SSBP1-214ENST00000498107 C4orf32Q8N8J7 132 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 ERMNQ8TAM6 284 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 NEK9Q8TD19 979 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 ATP8B4Q8TF62 1192 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 ZNF396Q96N95 335 aaPredicted RBP17.97■□□□□ 0.47
SSBP1-214ENST00000498107 RNPEPQ9H4A4 650 aa17.97■□□□□ 0.47
SSBP1-214ENST00000498107 POTEB3A0JP26 581 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 F13A1P00488 732 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 FXR2P51116 673 aaKnown RBP eCLIP17.96■□□□□ 0.47
SSBP1-214ENST00000498107 PSMC5P62195 406 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 ATP2C1P98194 919 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-214ENST00000498107 SPIRE1Q08AE8 756 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 PPFIA1Q13136 1202 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 PDIA5Q14554 519 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 PTGISQ16647 500 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 POTEBQ6S5H4 581 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 DTHD1Q6ZMT9 781 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 BBXQ8WY36 941 aaPredicted RBP17.96■□□□□ 0.47
SSBP1-214ENST00000498107 NRBP2Q9NSY0 501 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 WDR81Q562E7 1941 aa17.96■□□□□ 0.47
SSBP1-214ENST00000498107 EML1O00423 815 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 B4GALT4O60513 344 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 TECP42680 631 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
SSBP1-214ENST00000498107 SF3A1Q15459 793 aaKnown RBP17.95■□□□□ 0.46
SSBP1-214ENST00000498107 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 GDF6Q6KF10 455 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-214ENST00000498107 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 TRPV6Q9H1D0 765 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 PRDM5Q9NQX1 630 aaPredicted RBP17.95■□□□□ 0.46
SSBP1-214ENST00000498107 PDLIM7Q9NR12 457 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 TRMT13Q9NUP7 481 aaKnown RBP17.95■□□□□ 0.46
SSBP1-214ENST00000498107 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
SSBP1-214ENST00000498107 COL1A2P08123 1366 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 KIAA0355O15063 1070 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 RPLP2P05387 115 aaKnown RBP17.94■□□□□ 0.46
SSBP1-214ENST00000498107 INSRRP14616 1297 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 HOXC8P31273 242 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 GRIK4Q16099 956 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 XKR3Q5GH77 459 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 HAUS3Q68CZ6 603 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 ZSWIM4Q9H7M6 989 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 SETD4Q9NVD3 440 aa17.94■□□□□ 0.46
SSBP1-214ENST00000498107 POTEMA6NI47 508 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 BRD1O95696 1058 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 OATP04181 439 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 NUCB2P80303 420 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 PRKCEQ02156 737 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 PTK7Q13308 1070 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 BFSP2Q13515 415 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 C4orf19Q8IY42 314 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 CAGE1Q8TC20 777 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 LMBR1Q8WVP7 490 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 EIF2AK1Q9BQI3 630 aaKnown RBP17.93■□□□□ 0.46
SSBP1-214ENST00000498107 LXNQ9BS40 222 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 TUFT1Q9NNX1 390 aa17.93■□□□□ 0.46
SSBP1-214ENST00000498107 LRWD1Q9UFC0 647 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms