RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 ASGR2P07307 311 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 MMEP08473 750 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 NCAM1P13591 858 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 FAHP16930 419 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 PFKLP17858 780 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 ITGB5P18084 799 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
CLK1-213ENST00000492793 SEC23AQ15436 765 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 BROXQ5VW32 411 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 CC2D1AQ6P1N0 951 aaPredicted RBP5.4□□□□□ -1.54
CLK1-213ENST00000492793 FAM26EQ8N5C1 309 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 SLC5A5Q92911 643 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 GBP4Q96PP9 640 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 SGPP1Q9BX95 441 aa5.4□□□□□ -1.54
CLK1-213ENST00000492793 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.54
CLK1-213ENST00000492793 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.39□□□□□ -1.55
CLK1-213ENST00000492793 ACOT7O00154 380 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 APOL3O95236 402 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 C4BPAP04003 597 aaKnown RBP5.39□□□□□ -1.55
CLK1-213ENST00000492793 CYP17A1P05093 508 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 LSP1P33241 339 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 MC3RP41968 323 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 TARBP2Q15633 366 aaKnown RBP5.39□□□□□ -1.55
CLK1-213ENST00000492793 BRDTQ58F21 947 aaPredicted RBP5.39□□□□□ -1.55
CLK1-213ENST00000492793 VASNQ6EMK4 673 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 TEPPQ6URK8 271 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 TMC5Q6UXY8 1006 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 WDR48Q8TAF3 677 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 DLG3Q92796 817 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 KCNN1Q92952 543 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.39□□□□□ -1.55
CLK1-213ENST00000492793 PHLDB1Q86UU1 1377 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 CARMIL2Q6F5E8 1435 aa5.39□□□□□ -1.55
CLK1-213ENST00000492793 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.38□□□□□ -1.55
CLK1-213ENST00000492793 HRKO00198 91 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 TGM5O43548 720 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 LRG1P02750 347 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 S100BP04271 92 aaPredicted RBP5.38□□□□□ -1.55
CLK1-213ENST00000492793 PDGFRBP09619 1106 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 CYP2C8P10632 490 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 YBX3P16989 372 aaKnown RBP eCLIP5.38□□□□□ -1.55
CLK1-213ENST00000492793 CD40P25942 277 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 SESN3P58005 492 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 PRAMEF18Q5VWM3 479 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 NECAB2Q7Z6G3 386 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 STK32CQ86UX6 486 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 LDHDQ86WU2 507 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 MIB1Q86YT6 1006 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 ZZZ3Q8IYH5 903 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 FBXO15Q8NCQ5 510 aaPredicted RBP5.38□□□□□ -1.55
CLK1-213ENST00000492793 TTLL11Q8NHH1 800 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 RTF1Q92541 710 aaKnown RBP5.38□□□□□ -1.55
CLK1-213ENST00000492793 KRTAP9-2Q9BYQ4 174 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 MCOLN1Q9GZU1 580 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 SLC39A2Q9NP94 309 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 NGRNQ9NPE2 291 aaKnown RBP5.38□□□□□ -1.55
CLK1-213ENST00000492793 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 RBPJLQ9UBG7 517 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 WASHC2CQ9Y4E1 1318 aa5.38□□□□□ -1.55
CLK1-213ENST00000492793 MYOCOSA0A1B0GUC4 107 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 PEX10O60683 326 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 PRKD3O94806 890 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 ENO2P09104 434 aaPredicted RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 MC4RP32245 332 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CDR1P51861 262 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CACNB2Q08289 660 aaPredicted RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 MTMR1Q13613 665 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 TERF2Q15554 542 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CATSPEREQ5SY80 951 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CD276Q5ZPR3 534 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 C7orf31Q8N865 590 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 ASB15Q8WXK1 588 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 AHCYL2Q96HN2 611 aaKnown RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 TUBGCP5Q96RT8 1024 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 PUS7LQ9H0K6 701 aaKnown RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 CCDC8Q9H0W5 538 aaPredicted RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 MS4A5Q9H3V2 200 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 CNTD2Q9H8S5 307 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 MBD1Q9UIS9 605 aaPredicted RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 TRHDEQ9UKU6 1024 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 G3BP2Q9UN86 482 aaKnown RBP5.37□□□□□ -1.55
CLK1-213ENST00000492793 WASHC2AQ641Q2 1341 aa5.37□□□□□ -1.55
CLK1-213ENST00000492793 TEX51A0A1B0GUA7 166 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 UBA6A0AVT1 1052 aaPredicted RBP5.36□□□□□ -1.55
CLK1-213ENST00000492793 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 RASSF10A6NK89 507 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 KDM1AO60341 852 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 TMEM253P0C7T8 217 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 SDHAP31040 664 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 LIMS1P48059 325 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 GLRBP48167 497 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 FNTBP49356 437 aa5.36□□□□□ -1.55
CLK1-213ENST00000492793 SCAND1P57086 179 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms