RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 TBX2Q13207 712 aaPredicted RBP22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 GIT2Q14161 759 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 ARID5BQ14865 1188 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 HERC4Q5GLZ8 1057 aaPredicted RBP22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 MIER3Q7Z3K6 550 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 ANKRD23Q86SG2 305 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 RASAL3Q86YV0 1011 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 IRF2BP1Q8IU81 584 aa22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 A1CFQ9NQ94 594 aaKnown RBP22.38■■□□□ 1.17
ATP1A1-208ENST00000488733 N4BP3O15049 544 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 ARMCX5Q6P1M9 558 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 TSG101Q99816 390 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 SEMA6BQ9H3T3 888 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 SPTLC3Q9NUV7 552 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 KCND2Q9NZV8 630 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 TCEAL9Q9UHQ7 104 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 P4HBP07237 508 aaKnown RBP22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 CYP2C8P10632 490 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 RGMBQ6NW40 437 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 CCDC112Q8NEF3 446 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 GTF3C2Q8WUA4 911 aaPredicted RBP22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 RBPJLQ9UBG7 517 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 PCDHA2Q9Y5H9 948 aa22.37■■□□□ 1.17
ATP1A1-208ENST00000488733 PFASO15067 1338 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 NPHP3-ACAD11A0A0J9YXS1 232 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 TPM2P07951 284 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 PBX1P40424 430 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 CCZ1BP86790 482 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 CCZ1P86791 482 aaPredicted RBP22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 ITGB3BPQ13352 177 aaPredicted RBP22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 DNERQ8NFT8 737 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 SMCR8Q8TEV9 937 aaPredicted RBP22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 CDHR1Q96JP9 859 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 IWS1Q96ST2 819 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 TXNRD2Q9NNW7 524 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 TLL2Q9Y6L7 1015 aa22.36■■□□□ 1.17
ATP1A1-208ENST00000488733 TESPA1A2RU30 521 aaPredicted RBP22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 TEX33O43247 280 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 GAP43P17677 238 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 SFNP31947 248 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 KRT76Q01546 638 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 RINT1Q6NUQ1 792 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 INPP4AQ96PE3 977 aaPredicted RBP22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 PURBQ96QR8 312 aaKnown RBP22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 REEP2Q9BRK0 252 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 MOV10L1Q9BXT6 1211 aaKnown RBP22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 ZSWIM4Q9H7M6 989 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 COL4A3BPQ9Y5P4 624 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 ITIH6Q6UXX5 1313 aa22.35■■□□□ 1.17
ATP1A1-208ENST00000488733 DDX39AO00148 427 aaKnown RBP22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 TOMM70O94826 608 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 COPB2P35606 906 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 JAK3P52333 1124 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 CREBRFQ8IUR6 639 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 RDM1Q8NG50 284 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 PIGOQ8TEQ8 1089 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 LXNQ9BS40 222 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 VPS16Q9H269 839 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 TAB2Q9NYJ8 693 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 PKD2L1Q9P0L9 805 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 TBCAO75347 108 aaKnown RBP22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 NCAPG2Q86XI2 1143 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 ANKRD35Q8N283 1001 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 ZHX3Q9H4I2 956 aa22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.34■■□□□ 1.17
ATP1A1-208ENST00000488733 LOXHD1Q8IVV2 1947 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 LYPLA2O95372 231 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 SLC25A27O95847 323 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 KCNJ6P48051 423 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 RAD51AP2Q09MP3 1159 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 LRRC41Q15345 812 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 GNPTABQ3T906 1256 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 C1orf186Q6ZWK4 172 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 PPFIBP1Q86W92 1011 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 PTPN18Q99952 460 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 RUSC1Q9BVN2 902 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 ABT1Q9ULW3 272 aaKnown RBP22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 SAMM50Q9Y512 469 aa22.33■■□□□ 1.17
ATP1A1-208ENST00000488733 LGALS16A8MUM7 142 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 WDR64B1ANS9 1081 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 OFD1O75665 1012 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 SLC10A3P09131 477 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 ERCC3P19447 782 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 QARSP47897 775 aaKnown RBP22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 CACNB1Q02641 598 aaPredicted RBP22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 CNOT6LQ96LI5 555 aaKnown RBP22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 PARK7Q99497 189 aaKnown RBP22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 SENP7Q9BQF6 1050 aa22.32■■□□□ 1.16
ATP1A1-208ENST00000488733 MANSC4A6NHS7 340 aaPredicted RBP22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 TPM1P09493 284 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 ERVK-9P63128 1117 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 ERVK-24P63145 666 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 TRIM14Q14142 442 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 Q3C1V9 767 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 ZNF746Q6NUN9 644 aaPredicted RBP22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 PPP4R3CPQ6ZMV5 832 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 BANK1Q8NDB2 785 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 TUBGCP2Q9BSJ2 902 aa22.31■■□□□ 1.16
ATP1A1-208ENST00000488733 OLFML3Q9NRN5 406 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms