RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, human

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-C-208	ENST00000487245	VIL1	P09327	827 aa	Known RBP	28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	SPATA31C1	P0DKV0	1188 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	CACNA2D4	Q7Z3S7	1137 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	TRIM59	Q8IWR1	403 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	PSMD1	Q99460	953 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	MLXIP	Q9HAP2	919 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	TBC1D7	Q9P0N9	293 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	FAN1	Q9Y2M0	1017 aa		28.76	■■■□□ 2.19
HLA-C-208	ENST00000487245	NPHP3-ACAD11	A0A0J9YXS1	232 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	MSH4	O15457	936 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	GYS2	P54840	703 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	GIT2	Q14161	759 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	FKBP1C	Q5VVH2	108 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	COG1	Q8WTW3	980 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	EHMT1	Q9H9B1	1298 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	HPCAL4	Q9UM19	191 aa		28.75	■■■□□ 2.19
HLA-C-208	ENST00000487245	CETN3	O15182	167 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	PLA2G6	O60733	806 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	MOCS3	O95396	460 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	OGFOD1	Q8N543	542 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	GOLGA5	Q8TBA6	731 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	UIMC1	Q96RL1	719 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	GML	Q99445	158 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	TSKS	Q9UJT2	592 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	VAV3	Q9UKW4	847 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	ZC3H4	Q9UPT8	1303 aa	Known RBP	28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	KIF13B	Q9NQT8	1826 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	NOL4	O94818	638 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	SERPING1	P05155	500 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	NELFCD	Q8IXH7	590 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	TTLL6	Q8N841	843 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	SMCR8	Q8TEV9	937 aa	Predicted RBP	28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	OSBPL9	Q96SU4	736 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	VPS33B	Q9H267	617 aa		28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	28.74	■■■□□ 2.19
HLA-C-208	ENST00000487245	TBC1D12	O60347	775 aa		28.73	■■■□□ 2.19
HLA-C-208	ENST00000487245	SLC9C1	Q4G0N8	1177 aa		28.73	■■■□□ 2.19
HLA-C-208	ENST00000487245	CCDC102A	Q96A19	550 aa		28.73	■■■□□ 2.19
HLA-C-208	ENST00000487245	RPS6KA5	O75582	802 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	ADAM9	Q13443	819 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	SPDYE2	Q495Y8	402 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	SFMBT2	Q5VUG0	894 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	POTEA	Q6S8J7	498 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	SPICE1	Q8N0Z3	855 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	FGFBP2	Q9BYJ0	223 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	ZBTB21	Q9ULJ3	1066 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	TRAF3IP3	Q9Y228	551 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	EYA4	O95677	639 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	HOXA13	P31271	388 aa	Predicted RBP	28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	LMAN1	P49257	510 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	C2orf54	Q08AI8	447 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	FAM83B	Q5T0W9	1011 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	FAM160B2	Q86V87	743 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	ZHX3	Q9H4I2	956 aa		28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	LUC7L	Q9NQ29	371 aa	Known RBP	28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	MRPL11	Q9Y3B7	192 aa	Known RBP	28.72	■■■□□ 2.19
HLA-C-208	ENST00000487245	GCOM1	H8Y6P7	765 aa	Predicted RBP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	POLR2M	P0CAP2	368 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	ACTN2	P35609	894 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	ECE1	P42892	770 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	CACNB1	Q02641	598 aa	Predicted RBP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	PABPC4	Q13310	644 aa	Known RBP eCLIP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	AEN	Q8WTP8	325 aa	Known RBP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	NOX5	Q96PH1	765 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	RANBP17	Q9H2T7	1088 aa	Known RBP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	TUFT1	Q9NNX1	390 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	RNF216	Q9NWF9	866 aa	Predicted RBP	28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	RNF14	Q9UBS8	474 aa		28.71	■■■□□ 2.19
HLA-C-208	ENST00000487245	CALU	O43852	315 aa	Predicted RBP	28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	PSMC6	P62333	389 aa		28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	EPM2AIP1	Q7L775	607 aa	Predicted RBP	28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	SPATA4	Q8NEY3	305 aa		28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	ACER1	Q8TDN7	264 aa		28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	EIF2AK1	Q9BQI3	630 aa	Known RBP	28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	MYH10	P35580	1976 aa		28.7	■■■□□ 2.19
HLA-C-208	ENST00000487245	IGLV3-22	A0A075B6J6	115 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	CLRN2	A0PK11	232 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	TLR2	O60603	784 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	SYF2	O95926	243 aa	Known RBP	28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	ZSCAN26	Q16670	478 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	KNOP1	Q1ED39	458 aa	Known RBP	28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	FRMD5	Q7Z6J6	570 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	LARGE2	Q8N3Y3	721 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	MTMR14	Q8NCE2	650 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	REEP2	Q9BRK0	252 aa		28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	LSM14B	Q9BX40	385 aa	Known RBP	28.7	■■■□□ 2.18
HLA-C-208	ENST00000487245	PDXK	O00764	312 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	GAP43	P17677	238 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	MUT	P22033	750 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	TNNT3	P45378	269 aa	Predicted RBP	28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	GFPT1	Q06210	699 aa	Predicted RBP	28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	RAD51AP2	Q09MP3	1159 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	CAMKK2	Q96RR4	588 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	VCPKMT	Q9H867	229 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	AIPL1	Q9NZN9	384 aa		28.69	■■■□□ 2.18
HLA-C-208	ENST00000487245	CNTNAP1	P78357	1384 aa		28.68	■■■□□ 2.18
HLA-C-208	ENST00000487245	MEIS1	O00470	390 aa		28.68	■■■□□ 2.18
HLA-C-208	ENST00000487245	PRPF6	O94906	941 aa	Known RBP	28.68	■■■□□ 2.18
HLA-C-208	ENST00000487245	TNFRSF8	P28908	595 aa		28.68	■■■□□ 2.18
HLA-C-208	ENST00000487245	BMT2	Q1RMZ1	405 aa		28.68	■■■□□ 2.18

Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms