RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 ATP6V0A1Q93050 837 aa21.31■■□□□ 1
AGRN-208ENST00000479707 SNX21Q969T3 373 aa21.31■■□□□ 1
AGRN-208ENST00000479707 KCNMB3Q9NPA1 279 aa21.31■■□□□ 1
AGRN-208ENST00000479707 PCDHA10Q9Y5I2 948 aa21.31■■□□□ 1
AGRN-208ENST00000479707 MYH9P35579 1960 aaKnown RBP21.3■■□□□ 1
AGRN-208ENST00000479707 IGKV6D-21A0A0A0MT36 114 aa21.3■■□□□ 1
AGRN-208ENST00000479707 WDR64B1ANS9 1081 aa21.3■■□□□ 1
AGRN-208ENST00000479707 TREHO43280 583 aa21.3■■□□□ 1
AGRN-208ENST00000479707 PLCB4Q15147 1175 aa21.3■■□□□ 1
AGRN-208ENST00000479707 FAM160B1Q5W0V3 765 aa21.3■■□□□ 1
AGRN-208ENST00000479707 MFSD5Q6N075 450 aa21.3■■□□□ 1
AGRN-208ENST00000479707 PDXDC2PQ6P474 469 aa21.3■■□□□ 1
AGRN-208ENST00000479707 MIER3Q7Z3K6 550 aa21.3■■□□□ 1
AGRN-208ENST00000479707 HSCBQ8IWL3 235 aa21.3■■□□□ 1
AGRN-208ENST00000479707 SMAP1Q8IYB5 467 aaPredicted RBP21.3■■□□□ 1
AGRN-208ENST00000479707 HAS1Q92839 578 aa21.3■■□□□ 1
AGRN-208ENST00000479707 DISC1Q9NRI5 854 aa21.3■■□□□ 1
AGRN-208ENST00000479707 GABBR1Q9UBS5 961 aa21.3■■□□□ 1
AGRN-208ENST00000479707 TRPC6Q9Y210 931 aa21.3■■□□□ 1
AGRN-208ENST00000479707 WDR81Q562E7 1941 aa21.29■■□□□ 1
AGRN-208ENST00000479707 BAG4O95429 457 aaKnown RBP21.29■■□□□ 1
AGRN-208ENST00000479707 CSF2RAP15509 400 aa21.29■■□□□ 1
AGRN-208ENST00000479707 U2AF2P26368 475 aaKnown RBP eCLIP21.29■■□□□ 1
AGRN-208ENST00000479707 MCM7P33993 719 aa21.29■■□□□ 1
AGRN-208ENST00000479707 IGBP1P78318 339 aa21.29■■□□□ 1
AGRN-208ENST00000479707 FPGSQ05932 587 aa21.29■■□□□ 1
AGRN-208ENST00000479707 PPFIA1Q13136 1202 aa21.29■■□□□ 1
AGRN-208ENST00000479707 ZNF174Q15697 407 aa21.29■■□□□ 1
AGRN-208ENST00000479707 CKAP2LQ8IYA6 745 aa21.29■■□□□ 1
AGRN-208ENST00000479707 TMEM199Q8N511 208 aa21.29■■□□□ 1
AGRN-208ENST00000479707 DHX38Q92620 1227 aaKnown RBP21.29■■□□□ 1
AGRN-208ENST00000479707 SCLYQ96I15 445 aa21.29■■□□□ 1
AGRN-208ENST00000479707 FAM20AQ96MK3 541 aa21.29■■□□□ 1
AGRN-208ENST00000479707 GNAT1P11488 350 aa21.28■■□□□ 1
AGRN-208ENST00000479707 INSRRP14616 1297 aa21.28■■□□□ 1
AGRN-208ENST00000479707 BMP8BP34820 402 aa21.28■■□□□ 1
AGRN-208ENST00000479707 PTK7Q13308 1070 aa21.28■■□□□ 1
AGRN-208ENST00000479707 GRIK4Q16099 956 aa21.28■■□□□ 1
AGRN-208ENST00000479707 CALCRLQ16602 461 aa21.28■■□□□ 1
AGRN-208ENST00000479707 RETREG2Q8NC44 543 aa21.28■■□□□ 1
AGRN-208ENST00000479707 AFAP1L1Q8TED9 768 aa21.28■■□□□ 1
AGRN-208ENST00000479707 LMBR1Q8WVP7 490 aa21.28■■□□□ 1
AGRN-208ENST00000479707 WNT8BQ93098 351 aa21.28■■□□□ 1
AGRN-208ENST00000479707 WNT8AQ9H1J5 351 aa21.28■■□□□ 1
AGRN-208ENST00000479707 PRO3102Q9H379 93 aa21.28■■□□□ 1
AGRN-208ENST00000479707 NRCAMQ92823 1304 aa21.28■■□□□ 1
AGRN-208ENST00000479707 POTEB3A0JP26 581 aa21.27■■□□□ 1
AGRN-208ENST00000479707 TBX3O15119 743 aa21.27■■□□□ 1
AGRN-208ENST00000479707 NEMFO60524 1076 aa21.27■■□□□ 1
AGRN-208ENST00000479707 ATP4AP20648 1035 aa21.27■■□□□ 1
AGRN-208ENST00000479707 SFNP31947 248 aa21.27■■□□□ 1
AGRN-208ENST00000479707 JAK3P52333 1124 aa21.27■■□□□ 1
AGRN-208ENST00000479707 EPHB4P54760 987 aa21.27■■□□□ 1
AGRN-208ENST00000479707 BFSP2Q13515 415 aa21.27■■□□□ 1
AGRN-208ENST00000479707 NBR1Q14596 966 aa21.27■■□□□ 1
AGRN-208ENST00000479707 TTC38Q5R3I4 469 aa21.27■■□□□ 1
AGRN-208ENST00000479707 POTEBQ6S5H4 581 aa21.27■■□□□ 1
AGRN-208ENST00000479707 TRAPPC12Q8WVT3 735 aa21.27■■□□□ 1
AGRN-208ENST00000479707 ZBTB10Q96DT7 871 aa21.27■■□□□ 1
AGRN-208ENST00000479707 NOL7Q9UMY1 257 aaKnown RBP21.27■■□□□ 1
AGRN-208ENST00000479707 SCN5AQ14524 2016 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 RBAK-RBAKDNI3L0D1 243 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 EML1O00423 815 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 ACRP10323 421 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 HOXC8P31273 242 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 TXKP42681 527 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 B3GNT9Q6UX72 402 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 SLFN12Q8IYM2 578 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 CCDC155Q8N6L0 562 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 INTS4Q96HW7 963 aaKnown RBP21.26■□□□□ 0.99
AGRN-208ENST00000479707 TMEM60Q9H2L4 133 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 VAV3Q9UKW4 847 aa21.26■□□□□ 0.99
AGRN-208ENST00000479707 MAFBQ9Y5Q3 323 aaPredicted RBP21.26■□□□□ 0.99
AGRN-208ENST00000479707 VPS37CA5D8V6 355 aaPredicted RBP21.25■□□□□ 0.99
AGRN-208ENST00000479707 SLC26A2P50443 739 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 ADAM17P78536 824 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 PPIGQ13427 754 aaKnown RBP eCLIP21.25■□□□□ 0.994e-13■■□□□ 13.5
AGRN-208ENST00000479707 UGCGQ16739 394 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 NCAPH2Q6IBW4 605 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 SERINC5Q86VE9 423 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 CAGE1Q8TC20 777 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 ATP8B4Q8TF62 1192 aa21.25■□□□□ 0.99
AGRN-208ENST00000479707 TNPO1Q92973 898 aaKnown RBP21.25■□□□□ 0.99
AGRN-208ENST00000479707 HBP1O60381 514 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 IQCF3P0C7M6 154 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 CKBP12277 381 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 THPOP40225 353 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 TOB1P50616 345 aaPredicted RBP21.24■□□□□ 0.99
AGRN-208ENST00000479707 PPP2R5CQ13362 524 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 SHHQ15465 462 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 TRIM71Q2Q1W2 868 aaKnown RBP21.24■□□□□ 0.99
AGRN-208ENST00000479707 C9orf50Q5SZB4 431 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 MARCH8Q5T0T0 291 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 ZNF618Q5T7W0 954 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 RUFY4Q6ZNE9 571 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 DEFB128Q7Z7B8 93 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 SPRYD3Q8NCJ5 442 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 BANK1Q8NDB2 785 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 RDM1Q8NG50 284 aa21.24■□□□□ 0.99
AGRN-208ENST00000479707 TUBE1Q9UJT0 475 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms