RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 ZBTB10Q96DT7 871 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 GUCD1Q96NT3 240 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 KIF2CQ99661 725 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 ZNF577Q9BSK1 485 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 PBX4Q9BYU1 374 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 AZI2Q9H6S1 392 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 ERAP1Q9NZ08 941 aa9.4□□□□□ -0.9
HDAC6-221ENST00000477561 NRCAMQ92823 1304 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 RSPH10B2B2RC85 870 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 BACH1O14867 736 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 LGR5O75473 907 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 RSPH10BP0C881 870 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 INSRRP14616 1297 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 MYOGP15173 224 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 ATP2A2P16615 1042 aaKnown RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 HOXC8P31273 242 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 STAT5BP51692 787 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 FOSBP53539 338 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 ADAM17P78536 824 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 RBL2Q08999 1139 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 MBTPS1Q14703 1052 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 NPY5RQ15761 445 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 GRIK4Q16099 956 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 RUFY4Q6ZNE9 571 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 TRMT1LQ7Z2T5 733 aaKnown RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 TMCO2Q7Z6W1 182 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 TRAPPC12Q8WVT3 735 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 CDX2Q99626 313 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 OSBPL7Q9BZF2 842 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 NKX2-4Q9H2Z4 354 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 MSRAQ9UJ68 235 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 TRPC6Q9Y210 931 aa9.39□□□□□ -0.91
HDAC6-221ENST00000477561 YBX2Q9Y2T7 364 aaKnown RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 TRIP12Q14669 1992 aaPredicted RBP9.39□□□□□ -0.91
HDAC6-221ENST00000477561 EMSYQ7Z589 1322 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 M0R2N6 131 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 JAK2O60674 1132 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 ATG7O95352 703 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 TDP2O95551 362 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 CXCL10P02778 98 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 FDPSP14324 419 aaKnown RBP9.38□□□□□ -0.91
HDAC6-221ENST00000477561 CIITAP33076 1130 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 MCM2P49736 904 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 USP11P51784 963 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 SETQ01105 290 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-221ENST00000477561 GRIN2CQ14957 1233 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 INF2Q27J81 1249 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 MARCH8Q5T0T0 291 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 SWSAP1Q6NVH7 229 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 ABHD15Q6UXT9 468 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 PLPPR4Q7Z2D5 763 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 CCDC60Q8IWA6 550 aaPredicted RBP9.38□□□□□ -0.91
HDAC6-221ENST00000477561 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 DNAJB3Q8WWF6 145 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 MYLIPQ8WY64 445 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 GTF3C6Q969F1 213 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 LENG9Q96B70 501 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 PHF20Q9BVI0 1012 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 ZNF576Q9H609 170 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 TBC1D22BQ9NU19 505 aa9.38□□□□□ -0.91
HDAC6-221ENST00000477561 TANC1Q9C0D5 1861 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 IGKV6D-21A0A0A0MT36 114 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 POTEB3A0JP26 581 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 MSH4O15457 936 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 CHMP2AO43633 222 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
HDAC6-221ENST00000477561 XBP1P17861 261 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 KCNJ6P48051 423 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 WDR5P61964 334 aaKnown RBP9.37□□□□□ -0.91
HDAC6-221ENST00000477561 ST3GAL1Q11201 340 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 NONOQ15233 471 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC6-221ENST00000477561 RAB30Q15771 203 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 FAM160B1Q5W0V3 765 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 MIS18BP1Q6P0N0 1132 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 PDXDC2PQ6P474 469 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 CNKSR3Q6P9H4 555 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 POTEBQ6S5H4 581 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 CKAP2LQ8IYA6 745 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 DAGLBQ8NCG7 672 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 NSUN7Q8NE18 718 aaKnown RBP9.37□□□□□ -0.91
HDAC6-221ENST00000477561 DBF4BQ8NFT6 615 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 FAM49AQ9H0Q0 323 aaPredicted RBP9.37□□□□□ -0.91
HDAC6-221ENST00000477561 ZNF302Q9NR11 478 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 TCEAL9Q9UHQ7 104 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 TUBE1Q9UJT0 475 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 STXBP5LQ9Y2K9 1186 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 SSUH2Q9Y2M2 353 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 SAMM50Q9Y512 469 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 CDH23Q9H251 3354 aa9.37□□□□□ -0.91
HDAC6-221ENST00000477561 CCDC194A0A1B0GVG4 234 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 FAM205CA6NFA0 338 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 RRN3P2A6NIE6 340 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 GAS7O60861 476 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 BAIAP3O94812 1187 aa9.36□□□□□ -0.91
HDAC6-221ENST00000477561 CHRNA1P02708 482 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms