RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 EEF1B2P24534 225 aaKnown RBP12.43□□□□□ -0.42
U2AF1-209ENST00000475639 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
U2AF1-209ENST00000475639 DDX60Q8IY21 1712 aaKnown RBP12.43□□□□□ -0.42
U2AF1-209ENST00000475639 DRAXINQ8NBI3 349 aaPredicted RBP12.43□□□□□ -0.42
U2AF1-209ENST00000475639 MCUQ8NE86 351 aa12.43□□□□□ -0.42
U2AF1-209ENST00000475639 SMCR8Q8TEV9 937 aaPredicted RBP12.43□□□□□ -0.42
U2AF1-209ENST00000475639 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
U2AF1-209ENST00000475639 CEP19Q96LK0 163 aa12.43□□□□□ -0.42
U2AF1-209ENST00000475639 POLR3CQ9BUI4 534 aaPredicted RBP12.43□□□□□ -0.42
U2AF1-209ENST00000475639 NWD2Q9ULI1 1742 aa12.43□□□□□ -0.42
U2AF1-209ENST00000475639 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 FESP07332 822 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 RXRAP19793 462 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 TRIM60Q495X7 471 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 IPO11Q9UI26 975 aaKnown RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 ECM29Q5VYK3 1845 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 A0A087X0B3 334 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 C5orf60A6NFR6 353 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 E9PMD0 336 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 GLI1P08151 1106 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 GUCY2FP51841 1108 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 SKA2Q8WVK7 121 aaPredicted RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 RAB20Q9NX57 234 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 KRIT1O00522 736 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 MAN1A2O60476 641 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 TNNI1P19237 187 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 CXCR5P32302 372 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 MYLK4Q86YV6 388 aaPredicted RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 L3MBTL3Q96JM7 780 aaPredicted RBP12.42□□□□□ -0.42
U2AF1-209ENST00000475639 NLRC4Q9NPP4 1024 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 SFMBT1Q9UHJ3 866 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 PCDHGC5Q9Y5F6 944 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 BCL9LQ86UU0 1499 aa12.42□□□□□ -0.42
U2AF1-209ENST00000475639 TMOD1P28289 359 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 YARSP54577 528 aaKnown RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 ZNF449Q6P9G9 518 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 DCLK2Q8N568 766 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 MIGA1Q8NAN2 632 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 HYOU1Q9Y4L1 999 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 CAPN6Q9Y6Q1 641 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 ZBBXA8MT70 800 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 M0QZ92 97 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 RTN3O95197 1032 aaPredicted RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 EEF1GP26641 437 aaKnown RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 RRAGAQ7L523 313 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 KDM4CQ9H3R0 1056 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 HESX1Q9UBX0 185 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 MYH10P35580 1976 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 GTPBP10A4D1E9 387 aaKnown RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 FOXP2O15409 715 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 KRT81Q14533 505 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 ARHGAP44Q17R89 818 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 NFRKBQ6P4R8 1299 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 MREGQ8N565 214 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 MYCT1Q8N699 235 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 RBM12Q9NTZ6 932 aaKnown RBP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 SPDYE2BA6NHP3 402 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 AHCYL1O43865 530 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 SPDYE6P0CI01 402 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 GHRP10912 638 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 IFNA8P32881 189 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 IL9RQ01113 521 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 CYP27A1Q02318 531 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 TCP11X2Q5H9J9 407 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 SLC5A4Q9NY91 659 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 NIP7Q9Y221 180 aaKnown RBP eCLIP12.41□□□□□ -0.42
U2AF1-209ENST00000475639 ACEP12821 1306 aa12.41□□□□□ -0.42
U2AF1-209ENST00000475639 M0R2C6 588 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 PYGLP06737 847 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 LMNB2Q03252 620 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 NUDCD3Q8IVD9 361 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 BBS5Q8N3I7 341 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 OSBPL9Q96SU4 736 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 INTS9Q9NV88 658 aaKnown RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 SUCLA2Q9P2R7 463 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 TEKT2Q9UIF3 430 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 PACSIN2Q9UNF0 486 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 UPP2O95045 317 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 RIPK1Q13546 671 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 PPP2R5BQ15173 497 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 SLC30A9Q6PML9 568 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 TMTC3Q6ZXV5 915 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 KRT25Q7Z3Z0 450 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
U2AF1-209ENST00000475639 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 ANKRD35Q8N283 1001 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 NYXQ9GZU5 481 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 IFT122Q9HBG6 1241 aa12.4□□□□□ -0.42
U2AF1-209ENST00000475639 ARHGEF10LQ9HCE6 1279 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms