RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SUPT20HL2P0C7V6 817 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 PRPHP41219 470 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 ATP2C1P98194 919 aaPredicted RBP16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 C9orf50Q5SZB4 431 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 MIS18BP1Q6P0N0 1132 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 AFAP1L1Q8TED9 768 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 GJA10Q969M2 543 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 PDLIM7Q9NR12 457 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 PCDHA10Q9Y5I2 948 aa16.84■□□□□ 0.29
CDC42SE1-203ENST00000470278 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 REV3LO60673 3130 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 ITGB8P26012 769 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 SLC26A2P50443 739 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 PTGDRQ13258 359 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 TRIM60Q495X7 471 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 SLC39A5Q6ZMH5 540 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 TTC12Q9H892 705 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 PCDHA12Q9UN75 941 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 MORC2Q9Y6X9 1032 aaPredicted RBP16.83■□□□□ 0.28
CDC42SE1-203ENST00000470278 MROH7Q68CQ1 1323 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 H3BRB1 525 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 MARCH6O60337 910 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 PSAPP07602 524 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 FXR2P51116 673 aaKnown RBP eCLIP16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 ARL6IP4Q66PJ3 421 aaKnown RBP16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM109BQ6ICB4 259 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 NFRKBQ6P4R8 1299 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 PLPPR4Q7Z2D5 763 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 SESTD1Q86VW0 696 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 TRIM50Q86XT4 487 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 FERMT2Q96AC1 680 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 PCYT2Q99447 389 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 SMARCAD1Q9H4L7 1026 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 TUT1Q9H6E5 874 aaKnown RBP16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 AZI2Q9H6S1 392 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 DISC1Q9NRI5 854 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 CEP131Q9UPN4 1083 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 ATP11BQ9Y2G3 1177 aa16.82■□□□□ 0.28
CDC42SE1-203ENST00000470278 GRIN2DO15399 1336 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 ARVCFO00192 962 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 TXKP42681 527 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 PSEN2P49810 448 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 CDK7P50613 346 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 EPHB4P54760 987 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 PTPN11Q06124 597 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 ITGA7Q13683 1181 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 MFSD10Q14728 455 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 SHHQ15465 462 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 KIAA0753Q2KHM9 967 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM160B1Q5W0V3 765 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 ANKRD33Q7Z3H0 272 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 MIER3Q7Z3K6 550 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 ZDHHC9Q9Y397 364 aa16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 MAFBQ9Y5Q3 323 aaPredicted RBP16.81■□□□□ 0.28
CDC42SE1-203ENST00000470278 MYH9P35579 1960 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 HOXC8P31273 242 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 STAT5BP51692 787 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 PSMC6P62333 389 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 NUCB2P80303 420 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 SF3A1Q15459 793 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 TMEM266Q2M3C6 531 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 UTP14CQ5TAP6 766 aaKnown RBP16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 ATL3Q6DD88 541 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 FAM173BQ6P4H8 233 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 GLG1Q92896 1179 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 SAMM50Q9Y512 469 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 GBF1Q92538 1859 aa16.8■□□□□ 0.28
CDC42SE1-203ENST00000470278 EML1O00423 815 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 BACH1O14867 736 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 NASPP49321 788 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 PTPAQ15257 358 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 EPHA7Q15375 998 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 NBPF20Q3BBV1 942 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 IGSF22Q8N9C0 903 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 NEK9Q8TD19 979 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 BADQ92934 168 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 ATP6V0A1Q93050 837 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 ZNF396Q96N95 335 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 RAB34Q9BZG1 259 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 CIZ1Q9ULV3 898 aaPredicted RBP16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 MUC3AQ02505 3323 aa16.79■□□□□ 0.28
CDC42SE1-203ENST00000470278 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 POTEMA6NI47 508 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 TLE2Q04725 743 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 PDIA5Q14554 519 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 SWSAP1Q6NVH7 229 aa16.78■□□□□ 0.28
CDC42SE1-203ENST00000470278 PDXDC2PQ6P474 469 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms