RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 DYDC2Q96IM9 177 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 APBA2Q99767 749 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 TRIM9Q9C026 710 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 ANO10Q9NW15 660 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 RGL1Q9NZL6 768 aa14.25□□□□□ -0.13
TRAF4-208ENST00000469529 DBR1Q9UK59 544 aaKnown RBP14.25□□□□□ -0.13
TRAF4-208ENST00000469529 POTEB3A0JP26 581 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 UBA1P22314 1058 aaKnown RBP14.24□□□□□ -0.13
TRAF4-208ENST00000469529 HOXD10P28358 340 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 CTGFP29279 349 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 PSMC4P43686 418 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 SLC12A3P55017 1021 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 NLRP12P59046 1061 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 TYRO3Q06418 890 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 ACVR2BQ13705 512 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 LAMC2Q13753 1193 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 MORC3Q14149 939 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 KIF22Q14807 665 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 MIS18BP1Q6P0N0 1132 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 POTEBQ6S5H4 581 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 AFAP1L1Q8TED9 768 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 SEPT1Q8WYJ6 367 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 TRIM47Q96LD4 638 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 UIMC1Q96RL1 719 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 TSPY26PQ9H489 355 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 BMP2KQ9NSY1 1161 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-208ENST00000469529 ANKEF1Q9NU02 776 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 RMND1Q9NWS8 449 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 Q9Y3F1 56 aa14.24□□□□□ -0.13
TRAF4-208ENST00000469529 MAFBQ9Y5Q3 323 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-208ENST00000469529 GSTTP1A0A1W2PQM5 241 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 E9PMD0 336 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 RHOBTB3O94955 611 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 STBD1O95210 358 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 ARIH2O95376 493 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 TXNP10599 105 aaKnown RBP14.23□□□□□ -0.13
TRAF4-208ENST00000469529 AFMP43652 599 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 RGS19P49795 217 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 CUL4BQ13620 913 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 ARHGEF6Q15052 776 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 STX1AQ16623 288 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 DUSP28Q4G0W2 176 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 COBLL1Q53SF7 1204 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 CYFIP1Q7L576 1253 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 TPH2Q8IWU9 490 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 ATP6V0A1Q93050 837 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 BPIFA3Q9BQP9 254 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 LXNQ9BS40 222 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 BCAS3Q9H6U6 928 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 PPME1Q9Y570 386 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 LCTP09848 1927 aa14.23□□□□□ -0.13
TRAF4-208ENST00000469529 FRMD3A2A2Y4 597 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 POTEFA5A3E0 1075 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 MYMKA6NI61 221 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 CHMP2AO43633 222 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 KLRC4O43908 158 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 LGR5O75473 907 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 GGPS1O95749 300 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PRR29P0C7W0 189 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 ZNF865P0CJ78 1059 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-208ENST00000469529 HOXD8P13378 290 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-208ENST00000469529 CYP11B2P19099 503 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PRMT2P55345 433 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 SOX10P56693 466 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PSMC6P62333 389 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 EHHADHQ08426 723 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PSMD2Q13200 908 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 CTTNQ14247 550 aaKnown RBP14.22□□□□□ -0.13
TRAF4-208ENST00000469529 MCM6Q14566 821 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
TRAF4-208ENST00000469529 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 OTUD6AQ7L8S5 288 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PLPPR4Q7Z2D5 763 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 DNAJC19Q96DA6 116 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PLIN2Q99541 437 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 TIPINQ9BVW5 301 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 MLXIPQ9HAP2 919 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PDGFCQ9NRA1 345 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 PKD2L1Q9P0L9 805 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-208ENST00000469529 MAN1B1Q9UKM7 699 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 SAMM50Q9Y512 469 aa14.22□□□□□ -0.13
TRAF4-208ENST00000469529 DDX39AO00148 427 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 PPFIA4O75335 1185 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 GH1P01241 217 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 RPN1P04843 607 aaKnown RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 BMP6P22004 513 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 SLC26A2P50443 739 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 CAP1Q01518 475 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 MLLT1Q03111 559 aaPredicted RBP14.21□□□□□ -0.13
TRAF4-208ENST00000469529 ARHGAP1Q07960 439 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 ARSHQ5FYA8 562 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 XKR3Q5GH77 459 aa14.21□□□□□ -0.13
TRAF4-208ENST00000469529 SWSAP1Q6NVH7 229 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms