RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ARSHQ5FYA8 562 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 TRAPPC3LQ5T215 181 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 PRR5LQ6MZQ0 368 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 LUC7LQ9NQ29 371 aaKnown RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 PCDHA1Q9Y5I3 950 aa21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 TNRC6CQ9HCJ0 1690 aaKnown RBP21.46■■□□□ 1.03
CNEP1R1-203ENST00000458059 A0A087WUV0 522 aaPredicted RBP21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 TTLL1O95922 423 aa21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 INPP5BP32019 993 aa21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 GTF2A1P52655 376 aaPredicted RBP21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 IQCKQ8N0W5 287 aa21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 CELF4Q9BZC1 486 aaKnown RBP21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 DPH5Q9H2P9 285 aa21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 MYH7BA7E2Y1 1941 aa21.45■■□□□ 1.03
CNEP1R1-203ENST00000458059 FLT3P36888 993 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 PROM2Q8N271 834 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 USP38Q8NB14 1042 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 NEUROG2Q9H2A3 272 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 PCDHAC2Q9Y5I4 1007 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 CAPN7Q9Y6W3 813 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 LSP1P33241 339 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 PRPF4BQ13523 1007 aaKnown RBP21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 ZFPM1Q8IX07 1006 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 UBLCP1Q8WVY7 318 aaPredicted RBP21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 NGLY1Q96IV0 654 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 KCTD10Q9H3F6 313 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 AMACRQ9UHK6 382 aa21.45■■□□□ 1.02
CNEP1R1-203ENST00000458059 MYH4Q9Y623 1939 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 H0YHG0 523 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 PLCG2P16885 1265 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 NFIAQ12857 509 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 RBM46Q8TBY0 533 aaKnown RBP21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 GANQ9H2C0 597 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 USP40Q9NVE5 1235 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 SERPINB13Q9UIV8 391 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 MYO1FO00160 1098 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 UCHL3P15374 230 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 ABCB4P21439 1286 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 QRICH1Q2TAL8 776 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 ALKBH5Q6P6C2 394 aaKnown RBP21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 LRRC27Q9C0I9 530 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 SEPT11Q9NVA2 429 aaKnown RBP21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 ARMCX3Q9UH62 379 aaPredicted RBP21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 PCDHA2Q9Y5H9 948 aa21.44■■□□□ 1.02
CNEP1R1-203ENST00000458059 E7EVH7 732 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 TMOD1P28289 359 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 CYP2W1Q8TAV3 490 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 REEP2Q9BRK0 252 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 RBAK-RBAKDNI3L0D1 243 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 ATP2C2O75185 946 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 GFPT2O94808 682 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 HDLBPQ00341 1268 aaKnown RBP21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 ODF2Q5BJF6 829 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 ICE2Q659A1 982 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 PPP4R3AQ6IN85 833 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 GBP6Q6ZN66 633 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 CATSPER3Q86XQ3 398 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 U2AF1L4Q8WU68 220 aaKnown RBP21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 P2RX7Q99572 595 aaKnown RBP21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 LRRC4CQ9HCJ2 640 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 TSKSQ9UJT2 592 aa21.43■■□□□ 1.02
CNEP1R1-203ENST00000458059 ZBTB5O15062 677 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 AKAP3O75969 853 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 TNNC1P63316 161 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 EXOC3L4Q17RC7 722 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 TBC1D16Q8TBP0 767 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 PCDHGC5Q9Y5F6 944 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 ABCB11O95342 1321 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 MAST2Q6P0Q8 1798 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 KIF4AO95239 1232 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 ANO3Q9BYT9 981 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 DAPK3O43293 454 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 CHMP2AO43633 222 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 GCNT3O95395 438 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 POLD1P28340 1107 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 IRF2BP2Q7Z5L9 587 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 METTL13Q8N6R0 699 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 PIGOQ8TEQ8 1089 aa21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 DHX36Q9H2U1 1008 aaKnown RBP21.42■■□□□ 1.02
CNEP1R1-203ENST00000458059 KRIT1O00522 736 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 SART1O43290 800 aaKnown RBP21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 PEX26Q7Z412 305 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 DAAM2Q86T65 1068 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 OTUD6BQ8N6M0 293 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 CEP63Q96MT8 703 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 NT5C3AQ9H0P0 336 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 BHMT2Q9H2M3 363 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 RGL1Q9NZL6 768 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 NAGPAQ9UK23 515 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 NOC2LQ9Y3T9 749 aaKnown RBP21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 ZBTB39O15060 712 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 KIAA0754O94854 1291 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 XRCC5P13010 732 aaKnown RBP21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 CTNNA1P35221 906 aaKnown RBP21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 HSD17B3P37058 310 aa21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 GLE1Q53GS7 698 aaKnown RBP21.41■■□□□ 1.02
CNEP1R1-203ENST00000458059 TRMT1LQ7Z2T5 733 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms