RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 FBRSQ9HAH7 460 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 CTNNA3Q9UI47 895 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 WDR33Q9C0J8 1336 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 IRS2Q9Y4H2 1338 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 TAF1P21675 1872 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 IQCA1LA6NCM1 817 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 CYP1A2P05177 515 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 GARTP22102 1010 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 ODF1Q14990 250 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 WTAPQ15007 396 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 KLHL40Q2TBA0 621 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 MAJINQ3KP22 176 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 NEK10Q6ZWH5 1172 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 TEX9Q8N6V9 391 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 NTPCRQ9BSD7 190 aaKnown RBP8.67□□□□□ -1.02
BRCC3-208ENST00000453705 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 TBC1D7Q9P0N9 293 aa8.67□□□□□ -1.02
BRCC3-208ENST00000453705 TCRBV5S4A2TA0A5A2 114 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 B2RBV5 119 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 GRK2P25098 689 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 CA8P35219 290 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 HADHAP40939 763 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 EIF1AXP47813 144 aaKnown RBP8.66□□□□□ -1.02
BRCC3-208ENST00000453705 KIF11P52732 1056 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PRKG2Q13237 762 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 SEMA3AQ14563 771 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 C1orf53Q5VUE5 145 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 KIAA0319Q5VV43 1072 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
BRCC3-208ENST00000453705 POMZP3Q6PJE2 187 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 IPMKQ8NFU5 416 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 AFAP1L1Q8TED9 768 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 TSGA13Q96PP4 275 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
BRCC3-208ENST00000453705 TMEM106CQ9BVX2 250 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 KCTD10Q9H3F6 313 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PCDHGB5Q9Y5G0 923 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PNPLA7Q6ZV29 1317 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 FAM170AA1A519 330 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 TGDSO95455 350 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PTGER2P43116 358 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 AP1B1Q10567 949 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 HS1BP3Q53T59 392 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 HEATR4Q86WZ0 1026 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 USP6NLQ92738 828 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 NACC2Q96BF6 587 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 PPP1R9BQ96SB3 815 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 TEX13BQ9BXU2 312 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 MRPL9Q9BYD2 267 aaKnown RBP8.66□□□□□ -1.02
BRCC3-208ENST00000453705 ELAC1Q9H777 363 aaKnown RBP8.66□□□□□ -1.02
BRCC3-208ENST00000453705 KLHL11Q9NVR0 708 aa8.66□□□□□ -1.02
BRCC3-208ENST00000453705 FRMPD2Q68DX3 1309 aaPredicted RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 GSG1L2A8MUP6 293 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 PLSCR1O15162 318 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 TNNT1P13805 278 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 AKR1B1P15121 316 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 CASTP20810 708 aaKnown RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 TIMM10P62072 90 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 CCNG2Q16589 344 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 BLOC1S2Q6QNY1 142 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 PASD1Q8IV76 773 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 NAXEQ8NCW5 288 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 MNS1Q8NEH6 495 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 EAF1Q96JC9 268 aaPredicted RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 SEC16BQ96JE7 1060 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 JAKMIP1Q96N16 626 aaKnown RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 MOGAT1Q96PD6 335 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 APOL5Q9BWW9 433 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 SLC5A4Q9NY91 659 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 LAMP5Q9UJQ1 280 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 CDC23Q9UJX2 597 aa8.65□□□□□ -1.02
BRCC3-208ENST00000453705 RTCBQ9Y3I0 505 aaKnown RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 R3HCC1Q9Y3T6 440 aaKnown RBP8.65□□□□□ -1.02
BRCC3-208ENST00000453705 PSME4Q14997 1843 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 FOXP2O15409 715 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 MYO1BO43795 1136 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 FOXD2O60548 495 aaPredicted RBP8.65□□□□□ -1.03
BRCC3-208ENST00000453705 GUCA1CO95843 209 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 HSPD1P10809 573 aaKnown RBP8.65□□□□□ -1.03
BRCC3-208ENST00000453705 GNAT2P19087 354 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 ADORA1P30542 326 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 MCAMP43121 646 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 ST3GAL1Q11201 340 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 TOB2Q14106 344 aaPredicted RBP8.65□□□□□ -1.03
BRCC3-208ENST00000453705 ADCK5Q3MIX3 580 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 PERM1Q5SV97 790 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 RNF135Q8IUD6 432 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 MYCT1Q8N699 235 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 CEP95Q96GE4 821 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 NACA2Q9H009 215 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 SMOC1Q9H4F8 434 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 PRKAG3Q9UGI9 489 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 NIP7Q9Y221 180 aaKnown RBP eCLIP8.65□□□□□ -1.03
BRCC3-208ENST00000453705 CRYL1Q9Y2S2 319 aa8.65□□□□□ -1.03
BRCC3-208ENST00000453705 EPN1Q9Y6I3 576 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms