RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 TBX3O15119 743 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 GAS7O60861 476 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 GGPS1O95749 300 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 BMP15O95972 392 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 F13A1P00488 732 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 HOXD8P13378 290 aaPredicted RBP10.36□□□□□ -0.75
RFX3-207ENST00000449190 CYFIP1Q7L576 1253 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 TMEM199Q8N511 208 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 SPATA33Q96N06 139 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 MBOAT7Q96N66 472 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 RIT2Q99578 217 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 TEKT3Q9BXF9 490 aa10.36□□□□□ -0.75
RFX3-207ENST00000449190 CIZ1Q9ULV3 898 aaPredicted RBP10.36□□□□□ -0.75
RFX3-207ENST00000449190 NFASCO94856 1347 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 HAS3O00219 553 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 LAD1O00515 517 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 MSH4O15457 936 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 SORBS3O60504 671 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 B4GALT4O60513 344 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 SLC34A2O95436 690 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 BRD1O95696 1058 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 KCNA2P16389 499 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 UBA1P22314 1058 aaKnown RBP10.35□□□□□ -0.75
RFX3-207ENST00000449190 KRT76Q01546 638 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 FPGSQ05932 587 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 SEMA3FQ13275 785 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 PPIGQ13427 754 aaKnown RBP eCLIP10.35□□□□□ -0.75
RFX3-207ENST00000449190 SHHQ15465 462 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 TMEM266Q2M3C6 531 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 HSDL1Q3SXM5 330 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 LRCH2Q5VUJ6 765 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 ATL3Q6DD88 541 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 GPR153Q6NV75 609 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 METTL7BQ6UX53 244 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 SESTD1Q86VW0 696 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 KAT2BQ92831 832 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 UIMC1Q96RL1 719 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 KATNAL1Q9BW62 490 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 TRPV6Q9H1D0 765 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 JPH1Q9HDC5 661 aaPredicted RBP10.35□□□□□ -0.75
RFX3-207ENST00000449190 CHMP5Q9NZZ3 219 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 SLC9A2Q9UBY0 812 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 CFAP45Q9UL16 551 aa10.35□□□□□ -0.75
RFX3-207ENST00000449190 DDX39AO00148 427 aaKnown RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 SLC37A4O43826 429 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 EDIL3O43854 480 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 ATP9AO75110 1047 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 OR52Z1P0C646 297 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 TXKP42681 527 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 PSEN2P49810 448 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 TOB1P50616 345 aaPredicted RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 SP4Q02446 784 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 FOXD4L6Q3SYB3 417 aaPredicted RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 FAM47CQ5HY64 1035 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 FOXD4L3Q6VB84 417 aaPredicted RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 SEPT1Q8WYJ6 367 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 SLC5A5Q92911 643 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 RAB34Q9BZG1 259 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 HIPK3Q9H422 1215 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 BCAS3Q9H6U6 928 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 TRMT13Q9NUP7 481 aaKnown RBP10.34□□□□□ -0.75
RFX3-207ENST00000449190 PCDHA12Q9UN75 941 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 PCDHB6Q9Y5E3 794 aa10.34□□□□□ -0.75
RFX3-207ENST00000449190 CEP290O15078 2479 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 LRRC37A2A6NM11 1700 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 BRCA2P51587 3418 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 F2P00734 622 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 NCLP19338 710 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 CYP2C18P33260 490 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 EPHB4P54760 987 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 CEBPZQ03701 1054 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 PTGDRQ13258 359 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 ITGB3BPQ13352 177 aaPredicted RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 PKP1Q13835 747 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 NBR1Q14596 966 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 MFSD10Q14728 455 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 STK38Q15208 465 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 SF3A1Q15459 793 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 C9orf50Q5SZB4 431 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 ZNF746Q6NUN9 644 aaPredicted RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 MIS18BP1Q6P0N0 1132 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 DTHD1Q6ZMT9 781 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 SMAP1Q8IYB5 467 aaPredicted RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 RPUSD2Q8IZ73 545 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 C7orf31Q8N865 590 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 RETREG2Q8NC44 543 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 LENG9Q96B70 501 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 GPR20Q99678 358 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 C16orf70Q9BSU1 422 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 NOC4LQ9BVI4 516 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 AZI2Q9H6S1 392 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 TFIP11Q9UBB9 837 aaKnown RBP10.33□□□□□ -0.76
RFX3-207ENST00000449190 HDAC6Q9UBN7 1215 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 SAMM50Q9Y512 469 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 STK24Q9Y6E0 443 aa10.33□□□□□ -0.76
RFX3-207ENST00000449190 WDR64B1ANS9 1081 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms