RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ZRSR1Q15695 479 aaKnown RBP16.41■□□□□ 0.22
SHANK2-210ENST00000449116 HYIQ5T013 277 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
SHANK2-210ENST00000449116 BANK1Q8NDB2 785 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 CDK5RAP3Q96JB5 506 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 LXNQ9BS40 222 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 NT5C3AQ9H0P0 336 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 UNC93B1Q9H1C4 597 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 ZNF302Q9NR11 478 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 RGL1Q9NZL6 768 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 GABBR1Q9UBS5 961 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 KCNH3Q9ULD8 1083 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 HPSEQ9Y251 543 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 HTTP42858 3142 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
SHANK2-210ENST00000449116 POTEB3A0JP26 581 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 CTAGE5O15320 804 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 DKC1O60832 514 aaKnown RBP eCLIP16.4■□□□□ 0.221e-6■■■■■ 39.3
SHANK2-210ENST00000449116 ADAMTS4O75173 837 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 CCL5P13501 91 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 NDUFA8P51970 172 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PSMC5P62195 406 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 GRB10Q13322 594 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 CTTNQ14247 550 aaKnown RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 KARSQ15046 597 aaKnown RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 MTFR1Q15390 333 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 ECM1Q16610 540 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 FSCN1Q16658 493 aaKnown RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 DGKDQ16760 1214 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 FAM160B1Q5W0V3 765 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 POTEBQ6S5H4 581 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 CCDC73Q6ZRK6 1079 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 AFAP1L1Q8TED9 768 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 ZNF333Q96JL9 665 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PCYT2Q99447 389 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PYM1Q9BRP8 204 aaKnown RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 AZI2Q9H6S1 392 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 ZSWIM4Q9H7M6 989 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PAK6Q9NQU5 681 aaPredicted RBP16.4■□□□□ 0.22
SHANK2-210ENST00000449116 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
SHANK2-210ENST00000449116 PGK1P00558 417 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 LGALS2P05162 132 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 SYKP43405 635 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 STAT5BP51692 787 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 BEX3Q00994 111 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 UGCGQ16739 394 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 RRAGBQ5VZM2 374 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 LHX8Q68G74 356 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 PLPPR4Q7Z2D5 763 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 KCTD17Q8N5Z5 321 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 PDILTQ8N807 584 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 PANK2Q9BZ23 570 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 RNF208Q9H0X6 261 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 KIAA1024Q9UPX6 916 aa16.39■□□□□ 0.21
SHANK2-210ENST00000449116 MAFBQ9Y5Q3 323 aaPredicted RBP16.39■□□□□ 0.21
SHANK2-210ENST00000449116 A0A087X0B3 334 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 MYADML2A6NDP7 307 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 POLR2DO15514 142 aaKnown RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 ZEB2O60315 1214 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 LYPLA2O95372 231 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 MYCP01106 439 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 PLCG1P19174 1290 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 CST5P28325 142 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 IRX5P78411 483 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 FAM160A1Q05DH4 1040 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 PDXDC2PQ6P474 469 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 POTEGQ6S5H5 508 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 RNF180Q86T96 592 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 C4orf19Q8IY42 314 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 KLHDC9Q8NEP7 349 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 GLG1Q92896 1179 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 PLIN2Q99541 437 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 SMARCAD1Q9H4L7 1026 aa16.38■□□□□ 0.21
SHANK2-210ENST00000449116 DDX19AQ9NUU7 478 aaKnown RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 WRAP73Q9P2S5 460 aaPredicted RBP16.38■□□□□ 0.21
SHANK2-210ENST00000449116 KPNA6O60684 536 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 MBD3O95983 291 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 MYL3P08590 195 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 ZNF286BP0CG31 522 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 LIG1P18858 919 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 STAT6P42226 847 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 SLC26A2P50443 739 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 SNW1Q13573 536 aaKnown RBP16.37■□□□□ 0.21
SHANK2-210ENST00000449116 E2F4Q16254 413 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 GNASQ5JWF2 1037 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 TRIM50Q86XT4 487 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
SHANK2-210ENST00000449116 ENGASEQ8NFI3 743 aa16.37■□□□□ 0.21
SHANK2-210ENST00000449116 DHX58Q96C10 678 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms