RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.01■■□□□ 1.43
VSX1-206ENST00000444511 RRN3P2A6NIE6 340 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 ARP10275 920 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 GHRP10912 638 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 ZNF76P36508 570 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 FBXO22Q8NEZ5 403 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 SP7Q8TDD2 431 aaPredicted RBP24.01■■□□□ 1.43
VSX1-206ENST00000444511 TNPO1Q92973 898 aaKnown RBP24.01■■□□□ 1.43
VSX1-206ENST00000444511 HLA-CQ95604 372 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 CCDC136Q96JN2 1154 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 JAKMIP1Q96N16 626 aaKnown RBP24.01■■□□□ 1.43
VSX1-206ENST00000444511 C17orf80Q9BSJ5 609 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 TRPC6Q9Y210 931 aa24.01■■□□□ 1.43
VSX1-206ENST00000444511 MBLAC1A4D2B0 266 aaPredicted RBP24■■□□□ 1.43
VSX1-206ENST00000444511 BMP1P13497 986 aa24■■□□□ 1.43
VSX1-206ENST00000444511 ADD1P35611 737 aaKnown RBP24■■□□□ 1.43
VSX1-206ENST00000444511 SREBF1P36956 1147 aa24■■□□□ 1.43
VSX1-206ENST00000444511 KCNQ1P51787 676 aa24■■□□□ 1.43
VSX1-206ENST00000444511 ACTR2P61160 394 aa24■■□□□ 1.43
VSX1-206ENST00000444511 APOBRQ0VD83 1088 aa24■■□□□ 1.43
VSX1-206ENST00000444511 MARCH8Q5T0T0 291 aa24■■□□□ 1.43
VSX1-206ENST00000444511 Q6ZUG5 572 aa24■■□□□ 1.43
VSX1-206ENST00000444511 DNAJB3Q8WWF6 145 aa24■■□□□ 1.43
VSX1-206ENST00000444511 KCNB2Q92953 911 aa24■■□□□ 1.43
VSX1-206ENST00000444511 PCYT2Q99447 389 aa24■■□□□ 1.43
VSX1-206ENST00000444511 AGO4Q9HCK5 861 aaKnown RBP24■■□□□ 1.43
VSX1-206ENST00000444511 MICAL3Q7RTP6 2002 aa24■■□□□ 1.43
VSX1-206ENST00000444511 INSRRP14616 1297 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 HSPA4P34932 840 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 CLK2P49760 499 aaKnown RBP23.99■■□□□ 1.43
VSX1-206ENST00000444511 MGAT3Q09327 533 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 PFKFB3Q16875 520 aaPredicted RBP23.99■■□□□ 1.43
VSX1-206ENST00000444511 BLOC1S2Q6QNY1 142 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 BRF1Q92994 677 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 SAMD11Q96NU1 681 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 SNX14Q9Y5W7 946 aa23.99■■□□□ 1.43
VSX1-206ENST00000444511 MEIS1O00470 390 aa23.98■■□□□ 1.43
VSX1-206ENST00000444511 RPLP2P05387 115 aaKnown RBP23.98■■□□□ 1.43
VSX1-206ENST00000444511 SCG2P13521 617 aa23.98■■□□□ 1.43
VSX1-206ENST00000444511 ITGB3BPQ13352 177 aaPredicted RBP23.98■■□□□ 1.43
VSX1-206ENST00000444511 LPIN1Q14693 890 aa23.98■■□□□ 1.43
VSX1-206ENST00000444511 JAKMIP3Q5VZ66 844 aa23.98■■□□□ 1.43
VSX1-206ENST00000444511 FAM49AQ9H0Q0 323 aaPredicted RBP23.98■■□□□ 1.43
VSX1-206ENST00000444511 CDY2AQ9Y6F7 541 aa23.98■■□□□ 1.43
VSX1-206ENST00000444511 STAT5BP51692 787 aa23.97■■□□□ 1.43
VSX1-206ENST00000444511 MRPS6P82932 125 aaKnown RBP23.97■■□□□ 1.43
VSX1-206ENST00000444511 NIPA1Q7RTP0 329 aa23.97■■□□□ 1.43
VSX1-206ENST00000444511 PLPPR4Q7Z2D5 763 aa23.97■■□□□ 1.43
VSX1-206ENST00000444511 ZBTB10Q96DT7 871 aa23.97■■□□□ 1.43
VSX1-206ENST00000444511 PLCB4Q15147 1175 aa23.96■■□□□ 1.43
VSX1-206ENST00000444511 EPC2Q52LR7 807 aa23.96■■□□□ 1.43
VSX1-206ENST00000444511 FBXO47Q5MNV8 452 aa23.96■■□□□ 1.43
VSX1-206ENST00000444511 CCDC12Q8WUD4 166 aaPredicted RBP23.96■■□□□ 1.43
VSX1-206ENST00000444511 NECAB3Q96P71 396 aaPredicted RBP23.96■■□□□ 1.43
VSX1-206ENST00000444511 C6orf50Q9HD87 102 aa23.96■■□□□ 1.43
VSX1-206ENST00000444511 M0QZ92 97 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 DDX39AO00148 427 aaKnown RBP23.95■■□□□ 1.42
VSX1-206ENST00000444511 REC8O95072 547 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 RPS6KB1P23443 525 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 AKAP17AQ02040 695 aaKnown RBP23.95■■□□□ 1.42
VSX1-206ENST00000444511 IER5Q5VY09 327 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 MCTP2Q6DN12 878 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 TSHZ1Q6ZSZ6 1077 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 PLA2G4DQ86XP0 818 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 IL17RAQ96F46 866 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 SIP14410 1827 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 REV3LO60673 3130 aa23.95■■□□□ 1.42
VSX1-206ENST00000444511 KAT6AQ92794 2004 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 ESYT2A0FGR8 921 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 POTEB3A0JP26 581 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 BACH1O14867 736 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 ATG7O95352 703 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 PSMA5P28066 241 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 SLC26A2P50443 739 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 PTPROQ16827 1216 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 POTEBQ6S5H4 581 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 TMEM192Q8IY95 271 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 REXO1Q8N1G1 1221 aaKnown RBP23.94■■□□□ 1.42
VSX1-206ENST00000444511 TRAPPC12Q8WVT3 735 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 ZMYND12Q9H0C1 365 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 XIRP2A4UGR9 3374 aa23.94■■□□□ 1.42
VSX1-206ENST00000444511 NID2Q14112 1375 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 FAM86B1E9PN63 330 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 PRPF3O43395 683 aaKnown RBP23.93■■□□□ 1.42
VSX1-206ENST00000444511 CCNE2O96020 404 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 FAM86B2P0C5J1 330 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 GPM6BQ13491 265 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 FAM160B1Q5W0V3 765 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 FBXL16Q8N461 479 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 FIBCD1Q8N539 461 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 MRPL38Q96DV4 380 aaKnown RBP23.93■■□□□ 1.42
VSX1-206ENST00000444511 PCDHA2Q9Y5H9 948 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 TRPV2Q9Y5S1 764 aa23.93■■□□□ 1.42
VSX1-206ENST00000444511 COL4A6Q14031 1691 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 MUC3AQ02505 3323 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 H3BNC9 293 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 ENPP3O14638 875 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 CYP3A4P08684 503 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 GNA11P29992 359 aa23.92■■□□□ 1.42
VSX1-206ENST00000444511 CD52P31358 61 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 151.3 ms