RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 TEX2Q8IWB9 1127 aa9.98□□□□□ -0.81
USP6NL-203ENST00000443016 SDF4Q9BRK5 362 aa9.98□□□□□ -0.81
USP6NL-203ENST00000443016 AZI2Q9H6S1 392 aa9.98□□□□□ -0.81
USP6NL-203ENST00000443016 ERAP1Q9NZ08 941 aa9.98□□□□□ -0.81
USP6NL-203ENST00000443016 TELO2Q9Y4R8 837 aa9.98□□□□□ -0.81
USP6NL-203ENST00000443016 NRCAMQ92823 1304 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 WDR5P61964 334 aaKnown RBP9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CEP55Q53EZ4 464 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 JAKMIP3Q5VZ66 844 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CYP2W1Q8TAV3 490 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 PHKBQ93100 1093 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 MXRA8Q9BRK3 442 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 C6orf50Q9HD87 102 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 TMEM260Q9NX78 707 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 SLC9A2Q9UBY0 812 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CYP46A1Q9Y6A2 500 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 ABHD14A-ACY1A0A1B0GW23 586 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 EFCAB14O75071 495 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CXCL10P02778 98 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 GNA11P29992 359 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CCT2P78371 535 aaKnown RBP9.97□□□□□ -0.81
USP6NL-203ENST00000443016 TRIM71Q2Q1W2 868 aaKnown RBP9.97□□□□□ -0.81
USP6NL-203ENST00000443016 RUFY3Q7L099 469 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 LMBR1Q8WVP7 490 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 SMARCAD1Q9H4L7 1026 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 CERS4Q9HA82 394 aa9.97□□□□□ -0.81
USP6NL-203ENST00000443016 SPTBN5Q9NRC6 3674 aaKnown RBP9.96□□□□□ -0.81
USP6NL-203ENST00000443016 CPLX1O14810 134 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 ST18O60284 1047 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 LGR5O75473 907 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 PPFIA1Q13136 1202 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 GPNMBQ14956 572 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 CCDC85BQ15834 202 aaPredicted RBP9.96□□□□□ -0.81
USP6NL-203ENST00000443016 E2F4Q16254 413 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 FAM117BQ6P1L5 589 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 TMCO2Q7Z6W1 182 aaPredicted RBP9.96□□□□□ -0.81
USP6NL-203ENST00000443016 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.81
USP6NL-203ENST00000443016 MICALL1Q8N3F8 863 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 TNPO1Q92973 898 aaKnown RBP9.96□□□□□ -0.81
USP6NL-203ENST00000443016 IL17RAQ96F46 866 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 SLC26A6Q9BXS9 759 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 TM6SF1Q9BZW5 370 aa9.96□□□□□ -0.81
USP6NL-203ENST00000443016 GSTTP1A0A1W2PQM5 241 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 SREBF1P36956 1147 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 IGBP1P78318 339 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 MBTPS1Q14703 1052 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 RSPH3Q86UC2 560 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 TRIM22Q8IYM9 498 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 MYOCDQ8IZQ8 938 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 FBXL16Q8N461 479 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 UPF3BQ9BZI7 483 aaKnown RBP9.96□□□□□ -0.82
USP6NL-203ENST00000443016 NCOA5Q9HCD5 579 aaKnown RBP9.96□□□□□ -0.82
USP6NL-203ENST00000443016 TRPC6Q9Y210 931 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 TANC1Q9C0D5 1861 aa9.96□□□□□ -0.82
USP6NL-203ENST00000443016 DDX39AO00148 427 aaKnown RBP9.95□□□□□ -0.82
USP6NL-203ENST00000443016 PRPF3O43395 683 aaKnown RBP9.95□□□□□ -0.82
USP6NL-203ENST00000443016 CAND2O75155 1236 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ARP10275 920 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 HOXC8P31273 242 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 DEFB103AP81534 67 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 MCTP2Q6DN12 878 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 TAF2Q6P1X5 1199 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 CCDC148Q8NFR7 591 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 BICD2Q8TD16 824 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ARNTL2Q8WYA1 636 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 RNF26Q9BY78 433 aaPredicted RBP9.95□□□□□ -0.82
USP6NL-203ENST00000443016 AGXT2Q9BYV1 514 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 TCEAL9Q9UHQ7 104 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 TUBE1Q9UJT0 475 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 BACH1O14867 736 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 PDIA3P30101 505 aaKnown RBP9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ACTR2P61160 394 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ADGRE1Q14246 886 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 GRIK4Q16099 956 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 CPLX2Q6PUV4 134 aaKnown RBP9.95□□□□□ -0.82
USP6NL-203ENST00000443016 TRAF7Q6Q0C0 670 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 SEPT8Q92599 483 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 REV3LO60673 3130 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 DOCK5Q9H7D0 1870 aa9.95□□□□□ -0.82
USP6NL-203ENST00000443016 ESYT2A0FGR8 921 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 MEIS1O00470 390 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 GJB5O95377 273 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 AMHP03971 560 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 IFNAR1P17181 557 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 CLK2P49760 499 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 STAT5BP51692 787 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 STK3Q13188 491 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 PKN1Q16512 942 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 PLA2G4DQ86XP0 818 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 USP38Q8NB14 1042 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 UIMC1Q96RL1 719 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 LARP6Q9BRS8 491 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 AGO4Q9HCK5 861 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 MTUS1Q9ULD2 1270 aa9.94□□□□□ -0.82
USP6NL-203ENST00000443016 RBM19Q9Y4C8 960 aaKnown RBP9.94□□□□□ -0.82
USP6NL-203ENST00000443016 NCOR1O75376 2440 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms