RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 ETNPPLQ8TBG4 499 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 NSUN6Q8TEA1 469 aaKnown RBP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 LENG9Q96B70 501 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 RMDN3Q96TC7 470 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 PDCD2LQ9BRP1 358 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 CCSER1Q9C0I3 900 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 SLC28A3Q9HAS3 691 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 KCNH3Q9ULD8 1083 aa13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 YBX2Q9Y2T7 364 aaKnown RBP13.2□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF236Q9UL36 1845 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 LOC102724159A0A0B4J2E5 919 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 FAM86C2PA6NEL3 165 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 FAM86B1E9PN63 330 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 ADAMTS4O75173 837 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF202O95125 648 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 FAM86B2P0C5J1 330 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 FCER1AP12319 257 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF445P59923 1031 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 PGM5Q15124 567 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 PWP2Q15269 919 aaKnown RBP13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 PRR16Q569H4 304 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 ALYREFQ86V81 257 aaKnown RBP13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 HAS1Q92839 578 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 TOX2Q96NM4 488 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 IWS1Q96ST2 819 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 UBIAD1Q9Y5Z9 338 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
AC009404.1-202ENST00000439955 SYNRGQ9UMZ2 1314 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 MYADML2A6NDP7 307 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 MEIS1O00470 390 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 MARCH6O60337 910 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 ZNF865P0CJ78 1059 aaPredicted RBP13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 CCND2P30279 289 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TXKP42681 527 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 RABGGTBP53611 331 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 RAB30Q15771 203 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 KCNA10Q16322 511 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TPRNQ4KMQ1 711 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 ARHGEF16Q5VV41 709 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 KANK3Q6NY19 840 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 ABRAQ8N0Z2 381 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 ANKRD35Q8N283 1001 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 MMP19Q99542 508 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TINF2Q9BSI4 451 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TNMDQ9H2S6 317 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 TTC12Q9H892 705 aaPredicted RBP13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 ADD3Q9UEY8 706 aaKnown RBP13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 PCDHA12Q9UN75 941 aa13.18□□□□□ -0.3
AC009404.1-202ENST00000439955 PLXNA1Q9UIW2 1896 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 REV3LO60673 3130 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 DNAJC25-GNG10A0A024R161 153 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 B4DLN1 442 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 RFXAPO00287 272 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 AKR1A1P14550 325 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 MYOGP15173 224 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 CYP2C18P33260 490 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 UBA7P41226 1012 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 TMEM31Q5JXX7 168 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 PSRC1Q6PGN9 363 aaPredicted RBP13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 FAM133AQ8N9E0 248 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 IL31RAQ8NI17 732 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 KHSRPQ92945 711 aaKnown RBP eCLIP13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 VTI1AQ96AJ9 217 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 EPSTI1Q96J88 318 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 CUEDC2Q9H467 287 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 JADE2Q9NQC1 790 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 LRWD1Q9UFC0 647 aa13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 HOOK1Q9UJC3 728 aaKnown RBP13.17□□□□□ -0.3
AC009404.1-202ENST00000439955 LRRC37A2A6NM11 1700 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 MSH4O15457 936 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 POLR2DO15514 142 aaKnown RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 MAFGO15525 162 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 NR3C2P08235 984 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 ITGB5P18084 799 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 EIF2AK2P19525 551 aaKnown RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 TECP42680 631 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 MRPS9P82933 396 aaKnown RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 KCTD2Q14681 263 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 SPECC1Q5M775 1068 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 USP49Q70CQ1 688 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 OTOP2Q7RTS6 562 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 IQUBQ8NA54 791 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 MPHOSPH6Q99547 160 aaKnown RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 RIT2Q99578 217 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 WDR11Q9BZH6 1224 aa13.16□□□□□ -0.3
AC009404.1-202ENST00000439955 DISC1Q9NRI5 854 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms