RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 LZTS2Q9BRK4 669 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PAGR1Q9BTK6 254 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 MYL10Q9BUA6 226 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 MKNK1Q9BUB5 465 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 ALDH8A1Q9H2A2 487 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 VAT1LQ9HCJ6 419 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 RNF186Q9NXI6 227 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 PPP1R9AQ9ULJ8 1098 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 MYH4Q9Y623 1939 aa7.09□□□□□ -1.27
ECHDC1-208ENST00000436638 UTRNP46939 3433 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 PHIPQ8WWQ0 1821 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 PLA2G6O60733 806 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TBC1D8O95759 1140 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 SNHG28P0DPA3 235 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 CYP2C8P10632 490 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 AMPD1P23109 780 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 ADH6P28332 368 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 CCNA1P78396 465 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TYRO3Q06418 890 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TROAPQ12815 778 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TRAF1Q13077 416 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 STK3Q13188 491 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 MOGSQ13724 837 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 COL9A3Q14050 684 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TOB2Q14106 344 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 PLS1Q14651 629 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 KIF22Q14807 665 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 OCLNQ16625 522 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 TTBK2Q6IQ55 1244 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 CPXCR1Q8N123 301 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 DNAJC5GQ8N7S2 189 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 MB21D1Q8N884 522 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 PMM1Q92871 262 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 ATG4CQ96DT6 458 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 MRRFQ96E11 262 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 ZNF274Q96GC6 653 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 P2RX7Q99572 595 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 AGXT2Q9BYV1 514 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 SAGE1Q9NXZ1 904 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 SEC63Q9UGP8 760 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 CPA4Q9UI42 421 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 LIMCH1Q9UPQ0 1083 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 RABGAP1Q9Y3P9 1069 aa7.08□□□□□ -1.28
ECHDC1-208ENST00000436638 SHISA8B8ZZ34 492 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 TGFBR3LH3BV60 316 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 TLR2O60603 784 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CDKL5O76039 1030 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 STK10O94804 968 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 HSP90AA1P07900 732 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SMARCA1P28370 1054 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 PDIA3P30101 505 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 EVCP57679 992 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CCT2P78371 535 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SPEM2Q0P670 501 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CRHR2Q13324 411 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 ARHGEF6Q15052 776 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 ZKSCAN8Q15776 578 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 C11orf91Q3C1V1 193 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CCDC174Q6PII3 467 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SND1Q7KZF4 910 aaKnown RBP eCLIP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 RASGRP2Q7LDG7 609 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 HOMER1Q86YM7 354 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 HSCBQ8IWL3 235 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 ADGRF4Q8IZF3 695 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 ANKRD13CQ8N6S4 541 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 GPRC5AQ8NFJ5 357 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CLP1Q92989 425 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 RRP36Q96EU6 259 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SCARF2Q96GP6 870 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 KIF2CQ99661 725 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SLC30A3Q99726 388 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 YY1AP1Q9H869 796 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 SH2B1Q9NRF2 756 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 FBXO28Q9NVF7 368 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CXXC1Q9P0U4 656 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 KLHL42Q9P2K6 505 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 MAD2L2Q9UI95 211 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 TPCN1Q9ULQ1 816 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 LOC285556D6RIA3 1793 aa7.07□□□□□ -1.28
ECHDC1-208ENST00000436638 CCDC194A0A1B0GVG4 234 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 VWA5AO00534 786 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 PLEKHA8P1O95397 391 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 SLC25A27O95847 323 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 HSPA1AP0DMV8 641 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 HSPA1BP0DMV9 641 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 STAT3P40763 770 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 OAZ1P54368 228 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 SP3Q02447 781 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 SSRP1Q08945 709 aaKnown RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 NAA30Q147X3 362 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 FAM110CQ1W6H9 321 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 TKFCQ3LXA3 575 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 ZNF468Q5VIY5 522 aaPredicted RBP7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 LBX2Q6XYB7 198 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 SLCO4C1Q6ZQN7 724 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 TMTC3Q6ZXV5 915 aa7.06□□□□□ -1.28
ECHDC1-208ENST00000436638 RAB44Q7Z6P3 723 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms